RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PTPRRQ15256 657 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 TOR1AIP2Q8NFQ8 470 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 VRK1Q99986 396 aaPredicted RBP6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 PACSIN1Q9BY11 444 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 CPNE5Q9HCH3 593 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 PRDM11Q9NQV5 511 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 SAP30BPQ9UHR5 308 aaKnown RBP6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 MCM8Q9UJA3 840 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 COL14A1Q05707 1796 aaKnown RBP6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 PARP4Q9UKK3 1724 aaKnown RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 WDR17Q8IZU2 1322 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 VIRMAQ69YN4 1812 aaKnown RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 LRRC14BA6NHZ5 514 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 CHRM2P08172 466 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 HSP90AB1P08238 724 aaKnown RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 MYBL2P10244 700 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 IRX6P78412 446 aaPredicted RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 KIF23Q02241 960 aaPredicted RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 RAB39AQ14964 217 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 TAF7Q15545 349 aaPredicted RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 ATP2B3Q16720 1220 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 C1orf141Q5JVX7 400 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 TAPT1Q6NXT6 567 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 POC1BQ8TC44 478 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 RAPGEF4Q8WZA2 1011 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 ARHGAP45Q92619 1136 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 TSR2Q969E8 191 aaKnown RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 SMOC2Q9H3U7 446 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 CHMP4BQ9H444 224 aaKnown RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 SMC4Q9NTJ3 1288 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 CALCOCO1Q9P1Z2 691 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 COL16A1Q07092 1604 aaPredicted RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 PHLPP1O60346 1717 aa6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 COL5A2P05997 1499 aaPredicted RBP6.02□□□□□ -1.45
DEPDC1B-203ENST00000505017 ADGRA2Q96PE1 1338 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 BCAR3O75815 825 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 ZRANB2O95218 330 aaKnown RBP eCLIP6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 RHOP08100 348 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 HOXB7P09629 217 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 MALP21145 153 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 TWISTNBQ3B726 338 aaPredicted RBP6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 KHDC1Q4VXA5 237 aaKnown RBP6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 AKNAD1Q5T1N1 836 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 TSTD2Q5T7W7 516 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 ZNF530Q6P9A1 599 aaPredicted RBP6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 MICALCLQ6ZW33 695 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 AMIGO2Q86SJ2 522 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 CCDC136Q96JN2 1154 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 PGBD1Q96JS3 809 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 HEPHQ9BQS7 1158 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 ETAA1Q9NY74 926 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 ST3GAL5Q9UNP4 418 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 LAS1LQ9Y4W2 734 aaKnown RBP6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 SIPA1L3O60292 1781 aaPredicted RBP6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 KDM3BQ7LBC6 1761 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 SCN11AQ9UI33 1791 aa6.01□□□□□ -1.45
DEPDC1B-203ENST00000505017 MANSC4A6NHS7 340 aaPredicted RBP6□□□□□ -1.45
DEPDC1B-203ENST00000505017 XPOTO43592 962 aaKnown RBP6□□□□□ -1.45
DEPDC1B-203ENST00000505017 KATNA1O75449 491 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 CDK4P11802 303 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 ABCG1P45844 678 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 TOB1P50616 345 aaPredicted RBP6□□□□□ -1.45
DEPDC1B-203ENST00000505017 SLC16A1P53985 500 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 KRT85P78386 507 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 TFF2Q03403 129 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 DCTN1Q14203 1278 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 HLXQ14774 488 aaPredicted RBP6□□□□□ -1.45
DEPDC1B-203ENST00000505017 ATF7IPQ6VMQ6 1270 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 MCM10Q7L590 875 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 C1QL2Q7Z5L3 287 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 IL17REQ8NFR9 667 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 EXOC6Q8TAG9 804 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 DDB2Q92466 427 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 SNX19Q92543 992 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 RFKQ969G6 155 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 TRIB1Q96RU8 372 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 THUMPD2Q9BTF0 503 aaKnown RBP6□□□□□ -1.45
DEPDC1B-203ENST00000505017 TSPYL4Q9UJ04 414 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 AGAP1Q9UPQ3 857 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 NEU2Q9Y3R4 380 aa6□□□□□ -1.45
DEPDC1B-203ENST00000505017 TNKSO95271 1327 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 NWD2Q9ULI1 1742 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 PLCH1Q4KWH8 1693 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 MRC1P22897 1456 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 TOR1BO14657 336 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 RNMTO43148 476 aaKnown RBP5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 PLIN1O60240 522 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 CLSTN1O94985 981 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 PCSK6P29122 969 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 NPTX2P47972 431 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 GUCY2FP51841 1108 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 TEFQ10587 303 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 CCDC93Q567U6 631 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 GRASPQ7Z6J2 395 aaPredicted RBP5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 FTSJ3Q8IY81 847 aaKnown RBP5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 API5Q9BZZ5 524 aaKnown RBP5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 SPC25Q9HBM1 224 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 DDX19BQ9UMR2 479 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 MEGF6O75095 1541 aa5.99□□□□□ -1.45
DEPDC1B-203ENST00000505017 PTPRCP08575 1304 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms