RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 FAXCQ5TGI0 409 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 VPS53Q5VIR6 699 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 ICE2Q659A1 982 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 FCRL6Q6DN72 434 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 KRT28Q7Z3Y7 464 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZNF354CQ86Y25 554 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 SYNE4Q8N205 404 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 Q8NA96 180 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 SPATA5Q8NB90 893 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 B3GALNT2Q8NCR0 500 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 MYRIPQ8NFW9 859 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 SLC25A43Q8WUT9 341 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 NACC2Q96BF6 587 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 BOD1Q96IK1 185 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 NELL2Q99435 816 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 PCDHAC1Q9H158 963 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 CXorf36Q9H7Y0 433 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 INTS13Q9NVM9 706 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 TESQ9UGI8 421 aaKnown RBP5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZMYND8Q9ULU4 1186 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 HPSEQ9Y251 543 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 SPATA31A3Q5VYP0 1347 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 LGALS16A8MUM7 142 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 NPIPB8E9PQR5 432 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 PIP5K1CO60331 668 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 GATA3P23771 443 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 MCM7P33993 719 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 GDF5P43026 501 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 VAV2P52735 878 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 SLC25A3Q00325 362 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 GUCY1B3Q02153 619 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZNF750Q32MQ0 723 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 BEAN1Q3B7T3 259 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZACNQ401N2 412 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 DEPDC1Q5TB30 811 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 ARMC6Q6NXE6 501 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 CPXCR1Q8N123 301 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 ATRIPQ8WXE1 791 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 FAM136AQ96C01 138 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 PTCD3Q96EY7 689 aaKnown RBP5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 ACTRT3Q9BYD9 372 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 MYLK2Q9H1R3 596 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 FAM83DQ9H4H8 585 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 DACT1Q9NYF0 836 aa5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 DNMT3BQ9UBC3 853 aaKnown RBP5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 REXO2Q9Y3B8 237 aaKnown RBP5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.82□□□□□ -1.48
TRAPPC13-205ENST00000504243 AQP12BA6NM10 295 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 CCNT2O60583 730 aaKnown RBP5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZNF202O95125 648 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 SRGAP2BP0DMP2 458 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 MAKP20794 623 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 GABRB3P28472 473 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 ADORA2AP29274 412 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 PDIA3P30101 505 aaKnown RBP5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 PPIFP30405 207 aaKnown RBP5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 GRK6P43250 576 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 MTHFSP49914 203 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 ABHD18Q0P651 414 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 BIRC3Q13489 604 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 RAPGEF1Q13905 1077 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 SPARCL1Q14515 664 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 ARHGAP15Q53QZ3 475 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 USP17L6PQ6QN14 398 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 TOR1AIP2Q8NFQ8 470 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 SLC30A5Q8TAD4 765 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 PPM1EQ8WY54 764 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 HAS1Q92839 578 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 GRAMD1AQ96CP6 724 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZBTB45Q96K62 511 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 RMDN3Q96TC7 470 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 PRPF18Q99633 342 aaKnown RBP5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 SLC25A32Q9H2D1 315 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 UNKLQ9H9P5 680 aaKnown RBP5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 TBCCD1Q9NVR7 557 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 TMOD4Q9NZQ9 345 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 DKK4Q9UBT3 224 aa5.81□□□□□ -1.48
TRAPPC13-205ENST00000504243 A0A087WZ62 844 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 TRIM38O00635 465 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 PPM1DO15297 605 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 SNX2O60749 519 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 HGFP14210 728 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 PPP3CBP16298 524 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 PDE6CP51160 858 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 EIF2B5Q13144 721 aaKnown RBP5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 TP53BP2Q13625 1128 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 CCNIQ14094 377 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 PRR16Q569H4 304 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 RAP1GAP2Q684P5 730 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 SP5Q6BEB4 398 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 MZT2AQ6P582 158 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 TMPRSS9Q7Z410 1059 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 CCDC28AQ8IWP9 274 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 SMAP1Q8IYB5 467 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 Q8N1X5 172 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 CYP2W1Q8TAV3 490 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 OSCP1Q8WVF1 389 aa5.8□□□□□ -1.48
TRAPPC13-205ENST00000504243 LENG9Q96B70 501 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms