RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 NEUROG3Q9Y4Z2 214 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 NUB1Q9Y5A7 615 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 PCDHGA5Q9Y5G8 931 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 ATG2BQ96BY7 2078 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 NID2Q14112 1375 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 NUP205Q92621 2012 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 SMG1Q96Q15 3661 aaKnown RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 SPAG17Q6Q759 2223 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 SDK1Q7Z5N4 2213 aa3.97□□□□□ -1.77
USP46-205ENST00000504078 MUC22E2RYF6 1773 aaPredicted RBP3.97□□□□□ -1.77
USP46-205ENST00000504078 TRIP11Q15643 1979 aa3.96□□□□□ -1.77
USP46-205ENST00000504078 A0A1B0GUA9 196 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 CCDC194A0A1B0GVG4 234 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 MTMR11A4FU01 709 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 FAM149AA5PLN7 773 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 TMEM189-UBE2V1I3L0A0 370 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 MEFVO15553 781 aaPredicted RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 PRPF3O43395 683 aaKnown RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 FOXD2O60548 495 aaPredicted RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 C1QL1O75973 258 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 APBB3O95704 486 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 KRT10P13645 584 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 CEACAM1P13688 526 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 HNRNPLP14866 589 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP46-205ENST00000504078 ATF2P15336 505 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 ENGP17813 658 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 ARL2P36404 184 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 PTGER3P43115 390 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 MCM2P49736 904 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 RARRES1P49788 294 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 CLDN6P56747 220 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 GPLD1P80108 840 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 EXOSC10Q01780 885 aaKnown RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 KDSRQ06136 332 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 SPIRE1Q08AE8 756 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 FCHO2Q0JRZ9 810 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 GRSF1Q12849 480 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP46-205ENST00000504078 DUSP4Q13115 394 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 MXD4Q14582 209 aaPredicted RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 EPHA7Q15375 998 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 NTRK3Q16288 839 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 UPP1Q16831 310 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 ITPRIPL2Q3MIP1 535 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 ARHGAP29Q52LW3 1261 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 CCDC157Q569K6 752 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 C2orf27AQ580R0 203 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 TMEM196Q5HYL7 178 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 DGKKQ5KSL6 1271 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 NT5DC1Q5TFE4 455 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 SDHAF4Q5VUM1 108 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 CDCA2Q69YH5 1023 aaPredicted RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 PPP4R3AQ6IN85 833 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 SLC8B1Q6J4K2 584 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 PDXDC1Q6P996 788 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 GAREM2Q75VX8 874 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 HAUS6Q7Z4H7 955 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 NEK8Q86SG6 692 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 RALGPS2Q86X27 583 aaPredicted RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 C4orf19Q8IY42 314 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 GPR65Q8IYL9 337 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 TCEAL8Q8IYN2 117 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 ATAD1Q8NBU5 361 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 MDGA1Q8NFP4 955 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 TSTD1Q8NFU3 115 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 ZNF461Q8TAF7 563 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 PIP4K2CQ8TBX8 421 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 BPIFB1Q8TDL5 484 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 BORCS6Q96GS4 357 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 MSANTD3Q96H12 275 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 LOXL4Q96JB6 756 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 TBC1D32Q96NH3 1257 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 LRRC3Q9BY71 257 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 RNF26Q9BY78 433 aaPredicted RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 CCDC113Q9H0I3 377 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 ZSWIM4Q9H7M6 989 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 TRPC7Q9HCX4 862 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 KCNMB3Q9NPA1 279 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 CD93Q9NPY3 652 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 GKN1Q9NS71 199 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 TMEM74BQ9NUR3 256 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 PRMT7Q9NVM4 692 aaPredicted RBP3.96□□□□□ -1.78
USP46-205ENST00000504078 ANKFY1Q9P2R3 1169 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 MSRB2Q9Y3D2 182 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 BACE2Q9Y5Z0 518 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 WNT6Q9Y6F9 365 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 ZMYM2Q9UBW7 1377 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 NBEAQ8NFP9 2946 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 THADAQ6YHU6 1953 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 PKD1L2Q7Z442 2459 aa3.96□□□□□ -1.78
USP46-205ENST00000504078 PCDH15Q96QU1 1955 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 ANK1P16157 1881 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 CYP3A7-CYP3A51PA0A087WV96 503 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 SMIM28A0A1B0GU29 152 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 H7C4K7 107 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 ASAP2O43150 1006 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 DKC1O60832 514 aaKnown RBP eCLIP3.95□□□□□ -1.78
USP46-205ENST00000504078 MED24O75448 989 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 TADA3O75528 432 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 RHOBTB1O94844 696 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms