RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 MYLPFQ96A32 169 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 PCED1BQ96HM7 432 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 RTKNQ9BST9 563 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 EBF3Q9H4W6 596 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 TRPM5Q9NZQ8 1165 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 GMEB2Q9UKD1 530 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 CDV3Q9UKY7 258 aaKnown RBP12.75□□□□□ -0.37
MED28-203ENST00000503945 KIF26AQ9ULI4 1882 aaPredicted RBP12.75□□□□□ -0.37
MED28-203ENST00000503945 CCL26Q9Y258 94 aa12.75□□□□□ -0.37
MED28-203ENST00000503945 ATG2BQ96BY7 2078 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 FAM237AA0A1B0GTK4 181 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 GOLGA6L4A6NEF3 574 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 HRO43593 1189 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 ZNF202O95125 648 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 NR3C1P04150 777 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 CKMP06732 381 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 RPL13P26373 211 aaKnown RBP12.74□□□□□ -0.37
MED28-203ENST00000503945 FAM160A1Q05DH4 1040 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 DMWDQ09019 674 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 GRSF1Q12849 480 aaKnown RBP eCLIP12.74□□□□□ -0.37
MED28-203ENST00000503945 NR1H3Q13133 447 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 NCOA4Q13772 614 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 BECN1Q14457 450 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 PON2Q15165 354 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 PDGFRLQ15198 375 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 WDR44Q5JSH3 913 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 TDRD10Q5VZ19 366 aaKnown RBP12.74□□□□□ -0.37
MED28-203ENST00000503945 CEP135Q66GS9 1140 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 ARL14EPQ8N8R7 260 aaPredicted RBP12.74□□□□□ -0.37
MED28-203ENST00000503945 STKLD1Q8NE28 680 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 TMC2Q8TDI7 906 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 CHAMP1Q96JM3 812 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 TNIP3Q96KP6 325 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 C8orf48Q96LL4 319 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 XYLT2Q9H1B5 865 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 KCTD10Q9H3F6 313 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 RBM12Q9NTZ6 932 aaKnown RBP12.74□□□□□ -0.37
MED28-203ENST00000503945 RAB23Q9ULC3 237 aa12.74□□□□□ -0.37
MED28-203ENST00000503945 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.74□□□□□ -0.37
MED28-203ENST00000503945 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
MED28-203ENST00000503945 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
MED28-203ENST00000503945 CHURC1-FNTBB4DL54 471 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 ATG13O75143 517 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 RHOBTB3O94955 611 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 ABL1P00519 1130 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 PFKLP17858 780 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 FNTBP49356 437 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 CDH8P55286 799 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 NOP14P78316 857 aaKnown RBP12.73□□□□□ -0.37
MED28-203ENST00000503945 ADAM9Q13443 819 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 KCNB1Q14721 858 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 CCDC142Q17RM4 750 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 ZNF699Q32M78 642 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 LAIR1Q6GTX8 287 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 TXNDC11Q6PKC3 985 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 PRR23BQ6ZRT6 265 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 B3GALNT2Q8NCR0 500 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 TAF4BQ92750 862 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 ELOVL4Q9GZR5 314 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
MED28-203ENST00000503945 VRTNQ9H8Y1 702 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 DUS2Q9NX74 493 aaKnown RBP12.73□□□□□ -0.37
MED28-203ENST00000503945 MAPK8IP1Q9UQF2 711 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 TRAF3IP3Q9Y228 551 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 SDK1Q7Z5N4 2213 aa12.73□□□□□ -0.37
MED28-203ENST00000503945 C2orf78A6NCI8 922 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 F8VP50 259 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 TRDMT1O14717 391 aaKnown RBP12.72□□□□□ -0.37
MED28-203ENST00000503945 RETP07949 1114 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 KRT13P13646 458 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 TRIM21P19474 475 aaKnown RBP12.72□□□□□ -0.37
MED28-203ENST00000503945 HOXC13P31276 330 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 GALK1P51570 392 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 DPYDQ12882 1025 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 SRSF5Q13243 272 aaKnown RBP12.72□□□□□ -0.37
MED28-203ENST00000503945 SIM2Q14190 667 aaPredicted RBP12.72□□□□□ -0.37
MED28-203ENST00000503945 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 SV2AQ7L0J3 742 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 NUP93Q8N1F7 819 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 PLEKHO2Q8TD55 490 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 OSCP1Q8WVF1 389 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 SLC22A12Q96S37 553 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 MED10Q9BTT4 135 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 DPEP3Q9H4B8 488 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 C2orf42Q9NWW7 574 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 GCNT4Q9P109 453 aa12.72□□□□□ -0.37
MED28-203ENST00000503945 ATP8B3O60423 1300 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 ZNF638Q14966 1978 aaKnown RBP12.71□□□□□ -0.37
MED28-203ENST00000503945 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 OTOL1A6NHN0 477 aaPredicted RBP12.71□□□□□ -0.37
MED28-203ENST00000503945 K7ESF4 209 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 MAPK13O15264 365 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.37
MED28-203ENST00000503945 NR2F2P24468 414 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms