RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NCKAP1LP55160 1127 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 ME3Q16798 604 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 EMC10Q5UCC4 262 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 TOGARAM2Q6ZUX3 1019 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 KCNK18Q7Z418 384 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 LRRC15Q8TF66 581 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 ASB7Q9H672 318 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 DPP3Q9NY33 737 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 URB1O60287 2271 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 A0A0B4J269 797 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 A0A1W2PQD8 194 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 LEFTY2O00292 366 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 KIR2DL1P43626 348 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 DHCR24Q15392 516 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 PLEKHG6Q3KR16 790 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 FILIP1Q7Z7B0 1213 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 SFTPA1Q8IWL2 248 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 ADGRG2Q8IZP9 1017 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 ACBD6Q9BR61 282 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 FOXP1Q9H334 677 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 ARHGEF4Q9NR80 690 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 DKK4Q9UBT3 224 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 NOL7Q9UMY1 257 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 C2CD2Q9Y426 696 aa16.99■□□□□ 0.31
PDLIM7-210ENST00000503827 APC2O95996 2303 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 A0A0A0MRY4 1105 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 PP2D1A8MPX8 630 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 SLC9A3R1O14745 358 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 ADAM23O75077 832 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 GJB3O75712 270 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 PIGRP01833 764 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 CHRM1P11229 460 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 PFKLP17858 780 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 GRIA2P42262 883 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 TNFRSF4P43489 277 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 TRAPPC10P48553 1259 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 RESTQ13127 1097 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 KIAA1958Q8N8K9 716 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 SYT2Q8N9I0 419 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 SPRYD3Q8NCJ5 442 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 KCNN1Q92952 543 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 ZNF560Q96MR9 790 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 FAM124BQ9H5Z6 455 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 ZDHHC4Q9NPG8 344 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 KCND2Q9NZV8 630 aa16.98■□□□□ 0.31
PDLIM7-210ENST00000503827 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 SCP2P22307 547 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 ACOT2P49753 483 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 ZXDBP98169 803 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 ATP2C1P98194 919 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 MYL7Q01449 175 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 MESP2Q0VG99 397 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 GNL2Q13823 731 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 ZRSR1Q15695 479 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 INTS6LQ5JSJ4 861 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 GLRX5Q86SX6 157 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 SPATA2LQ8IUW3 424 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 SCN4BQ8IWT1 228 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 RGL4Q8IZJ4 473 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 C8orf76Q96K31 380 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 HSPA12BQ96MM6 686 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 PNMA5Q96PV4 448 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 UBL7Q96S82 380 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 DDX43Q9NXZ2 648 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 CALCOCO1Q9P1Z2 691 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 KIAA1522Q9P206 1035 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 SUSD2Q9UGT4 822 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 GTF3C4Q9UKN8 822 aa16.97■□□□□ 0.31
PDLIM7-210ENST00000503827 ZBTB24O43167 697 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 ZNF217O75362 1048 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 ADH1CP00326 375 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 GNSP15586 552 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 GABRG2P18507 467 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 PNPLA4P41247 253 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 KDSRQ06136 332 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 CFAP221Q4G0U5 840 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 TMPRSS7Q7RTY8 843 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 SLCO6A1Q86UG4 719 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 SLC41A1Q8IVJ1 513 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 PDCL2Q8N4E4 241 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 KCTD17Q8N5Z5 321 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 KCNV2Q8TDN2 545 aa16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 MMTAG2Q9BU76 263 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-210ENST00000503827 IGHV1OR15-9A0A0B4J2B8 117 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 K7ENM7 598 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 HUS1O60921 280 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 ADH5P11766 374 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 ACAT1P24752 427 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 SYCP2LQ5T4T6 812 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 RHBDF2Q6PJF5 856 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 C12orf40Q86WS4 652 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 SCUBE3Q8IX30 993 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 FUBP3Q96I24 572 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 ZDHHC5Q9C0B5 715 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 TRPM5Q9NZQ8 1165 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 PCOLCE2Q9UKZ9 415 aa16.95■□□□□ 0.3
PDLIM7-210ENST00000503827 A0A087WV48 116 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms