RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 PTGISQ16647 500 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 SMTNL2Q2TAL5 461 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 MAP3K21Q5TCX8 1036 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 RHBDF2Q6PJF5 856 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 OSTM1Q86WC4 334 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 HACE1Q8IYU2 909 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 ADGRF2Q8IZF7 708 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 FAM76AQ8TAV0 307 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 CAPNS2Q96L46 248 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 CCDC114Q96M63 670 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 CFHR5Q9BXR6 569 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 OSBPL7Q9BZF2 842 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 ASIC3Q9UHC3 531 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 USP18Q9UMW8 372 aa22.42■■□□□ 1.18
UBE2D3-216ENST00000503742 DPYSL4O14531 572 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 CCDC130P13994 396 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 KDELR1P24390 212 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 PMS2P54278 862 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 SLC6A3Q01959 620 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 ZNF844Q08AG5 666 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 KCNT1Q5JUK3 1230 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 CEP85LQ5SZL2 805 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 MRPL10Q7Z7H8 261 aaKnown RBP22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 PCSK9Q8NBP7 692 aaKnown RBP22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 SNF8Q96H20 258 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 TMBIM4Q9HC24 238 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 SLC38A7Q9NVC3 462 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 SRRDQ9UH36 339 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 PAPSS1O43252 624 aaPredicted RBP22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 PDGFRAP16234 1089 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 THPOP40225 353 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 MLH1P40692 756 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 BCAT1P54687 386 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 SNX16P57768 344 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 BST2Q10589 180 aaKnown RBP22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 ZDHHC17Q8IUH5 632 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 OR2W6PQ8NHA6 318 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 GAD1Q99259 594 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 TSPYL2Q9H2G4 693 aaPredicted RBP22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 PABPC3Q9H361 631 aaKnown RBP22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 CYLDQ9NQC7 956 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 DNPEPQ9ULA0 475 aa22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 DRG1Q9Y295 367 aaKnown RBP22.41■■□□□ 1.18
UBE2D3-216ENST00000503742 KLRC2P26717 231 aa22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 LMNB2Q03252 620 aa22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 BYSLQ13895 437 aaKnown RBP22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 CYP4V2Q6ZWL3 525 aaPredicted RBP22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 PEBP4Q96S96 227 aa22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 TRAIPQ9BWF2 469 aa22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 DNAI2Q9GZS0 605 aa22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 MIOSQ9NXC5 875 aa22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 PCSK1NQ9UHG2 260 aa22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 GIT1Q9Y2X7 761 aa22.4■■□□□ 1.18
UBE2D3-216ENST00000503742 MYCNP04198 464 aaPredicted RBP22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 IGFBP6P24592 240 aaPredicted RBP22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 AFF1P51825 1210 aaKnown RBP22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 OASLQ15646 514 aaKnown RBP22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 DEFB115Q30KQ5 88 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 CCDC14Q49A88 953 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 SH3PXD2AQ5TCZ1 1133 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 AGMOQ6ZNB7 445 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 SCUBE3Q8IX30 993 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 CCDC89Q8N998 374 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 LPPQ93052 612 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 TNIP3Q96KP6 325 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 PADI3Q9ULW8 664 aa22.39■■□□□ 1.18
UBE2D3-216ENST00000503742 CYB561D2O14569 222 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 GABRDO14764 452 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 ZNF623O75123 536 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 GRAP2O75791 330 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 CAPN15O75808 1086 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 THP07101 528 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 NUDT17P0C025 328 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 RARGP13631 454 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 ATF2P15336 505 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 ADORA2BP29275 332 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 SLMAPQ14BN4 828 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 TAF5Q15542 800 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 TRIP13Q15645 432 aaPredicted RBP22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 C15orf59Q2T9L4 293 aaPredicted RBP22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 BBS12Q6ZW61 710 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 ZNF365Q70YC5 407 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 NKD2Q969F2 451 aaPredicted RBP22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 ATP6V1G3Q96LB4 118 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 AAASQ9NRG9 546 aa22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 DDX20Q9UHI6 824 aaKnown RBP22.39■■□□□ 1.17
UBE2D3-216ENST00000503742 ARL5CA6NH57 179 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 ENDOD1O94919 500 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 CD48P09326 243 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 CD52P31358 61 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 VCPP55072 806 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 CAV1Q03135 178 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 PTK7Q13308 1070 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 DSC3Q14574 896 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 TRIM71Q2Q1W2 868 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 RAB6CQ53S08 254 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 B3GALNT2Q8NCR0 500 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 SLC35B2Q8TB61 432 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 SLC2A14Q8TDB8 520 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 B3GNT5Q9BYG0 378 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms