RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 CNPY3Q9BT09 278 aa23.6■■□□□ 1.37
PCDH1-204ENST00000503492 SGK1O00141 431 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 GRAP2O75791 330 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 AXLP30530 894 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 PCK1P35558 622 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 SOWAHAQ2M3V2 549 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 C15orf59Q2T9L4 293 aaPredicted RBP23.59■■□□□ 1.37
PCDH1-204ENST00000503492 CYP4V2Q6ZWL3 525 aaPredicted RBP23.59■■□□□ 1.37
PCDH1-204ENST00000503492 C9orf72Q96LT7 481 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 SERPINB12Q96P63 405 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 RBM15Q96T37 977 aaKnown RBP eCLIP23.59■■□□□ 1.37
PCDH1-204ENST00000503492 LPIN3Q9BQK8 851 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 FOXP3Q9BZS1 431 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 C10orf88Q9H8K7 445 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 KLK14Q9P0G3 267 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 TPX2Q9ULW0 747 aaKnown RBP23.59■■□□□ 1.37
PCDH1-204ENST00000503492 CHN1P15882 459 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 PDGFRAP16234 1089 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 CPT1AP50416 773 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 MIS12Q9H081 205 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 STMN4Q9H169 189 aaPredicted RBP23.59■■□□□ 1.37
PCDH1-204ENST00000503492 RNF39Q9H2S5 420 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 PCDH9Q9HC56 1237 aa23.59■■□□□ 1.37
PCDH1-204ENST00000503492 UBQLN1Q9UMX0 589 aaKnown RBP23.59■■□□□ 1.37
PCDH1-204ENST00000503492 PDCD11Q14690 1871 aaKnown RBP23.59■■□□□ 1.37
PCDH1-204ENST00000503492 HCRTO43612 131 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 IFNB1P01574 187 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 CDR1P51861 262 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 CCDC38Q502W7 563 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 UBXN11Q5T124 520 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 TTC13Q8NBP0 860 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 SLC4A5Q9BY07 1137 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 FAM107BQ9H098 131 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 ANKRD65E5RJM6 399 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 ZNF157P51786 506 aaPredicted RBP23.58■■□□□ 1.37
PCDH1-204ENST00000503492 RFX6Q8HWS3 928 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 OR6B3Q8NGW1 331 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 SLC35F5Q8WV83 523 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 CENPTQ96BT3 561 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 AP5M1Q9H0R1 490 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 DPEP3Q9H4B8 488 aa23.58■■□□□ 1.37
PCDH1-204ENST00000503492 SMIM28A0A1B0GU29 152 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 GABBR2O75899 941 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 PECAM1P16284 738 aaPredicted RBP23.57■■□□□ 1.36
PCDH1-204ENST00000503492 MAGEA4P43358 317 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 GDF10P55107 478 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 ERMARDQ5T6L9 678 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 RNASEH2BQ5TBB1 312 aaKnown RBP23.57■■□□□ 1.36
PCDH1-204ENST00000503492 OLFML1Q6UWY5 402 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 C17orf99Q6UX52 265 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 EXOC3L1Q86VI1 746 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 XPO6Q96QU8 1125 aaKnown RBP23.57■■□□□ 1.36
PCDH1-204ENST00000503492 FRMD8P1Q9BZ68 369 aaPredicted RBP23.57■■□□□ 1.36
PCDH1-204ENST00000503492 CTNNAL1Q9UBT7 734 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 PIRO00625 290 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 CCDC14Q49A88 953 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 UNC93AQ86WB7 457 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 CALN1Q9BXU9 219 aa23.57■■□□□ 1.36
PCDH1-204ENST00000503492 MANSC4A6NHS7 340 aaPredicted RBP23.56■■□□□ 1.36
PCDH1-204ENST00000503492 MYO1CO00159 1063 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 TCEA3O75764 348 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 ENDOD1O94919 500 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 MORF4L2Q15014 288 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 CDO1Q16878 200 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 TMEM110Q86TL2 294 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 KHSRPQ92945 711 aaKnown RBP eCLIP23.56■■□□□ 1.36
PCDH1-204ENST00000503492 CFAP57Q96MR6 1250 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 SAYSD1Q9NPB0 183 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 A8MXQ7 604 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 SPTLC1O15269 473 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 SETSIPP0DME0 302 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 PDE4CQ08493 712 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 MMRN1Q13201 1228 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 FBXO47Q5MNV8 452 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 KBTBD7Q8WVZ9 684 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 ATXN2LQ8WWM7 1075 aaKnown RBP23.56■■□□□ 1.36
PCDH1-204ENST00000503492 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.56■■□□□ 1.36
PCDH1-204ENST00000503492 HESX1Q9UBX0 185 aa23.56■■□□□ 1.36
PCDH1-204ENST00000503492 C17orf102A2RUQ5 167 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 FGFR1P11362 822 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 XKR4Q5GH76 650 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 ARHGAP17Q68EM7 881 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 CYP4F22Q6NT55 531 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 CEP128Q6ZU80 1094 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 B4GALNT4Q76KP1 1039 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 SCUBE3Q8IX30 993 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 RSAD1Q9HA92 442 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 Q9Y3F1 56 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 FAM169AQ9Y6X4 670 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 APOC4-APOC2K7ER74 178 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 PAPSS1O43252 624 aaPredicted RBP23.55■■□□□ 1.36
PCDH1-204ENST00000503492 CD4P01730 458 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 IGHA2P01877 340 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 APOC2P02655 101 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 RGS2P41220 211 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 CRYBB1P53674 252 aaPredicted RBP23.55■■□□□ 1.36
PCDH1-204ENST00000503492 CDH6P55285 790 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 ATP11AP98196 1134 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 SLC6A3Q01959 620 aa23.55■■□□□ 1.36
PCDH1-204ENST00000503492 SOX4Q06945 474 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms