RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CLDN5O00501 218 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 LILRB5O75023 590 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 KIF20AO95235 890 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 C4BPAP04003 597 aaKnown RBP20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 TDGF1P13385 188 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 CLDN10P78369 228 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 DPYDQ12882 1025 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 USP4Q13107 963 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 CCINQ13939 588 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 ZNF77Q15935 545 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 ZNF518BQ9C0D4 1074 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 ELOVL4Q9GZR5 314 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 VRTNQ9H8Y1 702 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 EHD2Q9NZN4 543 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 TRPM5Q9NZQ8 1165 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 NCDNQ9UBB6 729 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 SMG5Q9UPR3 1016 aaKnown RBP20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 MAPK8IP1Q9UQF2 711 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 OTOL1A6NHN0 477 aaPredicted RBP20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 RHOBTB3O94955 611 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 VNN1O95497 513 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 HDCP19113 662 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 CACNA2D1P54289 1103 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 IFRD2Q12894 506 aaPredicted RBP20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 PDGFRLQ15198 375 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 KRBA2Q6ZNG9 492 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 SH3RF2Q8TEC5 729 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 TMEM174Q8WUU8 243 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 C8orf48Q96LL4 319 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 B3GNT5Q9BYG0 378 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 EPC1Q9H2F5 836 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 DUS2Q9NX74 493 aaKnown RBP20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 GCNT4Q9P109 453 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 WNT6Q9Y6F9 365 aa20.7■□□□□ 0.9
UBE2D3-215ENST00000503418 ATG2BQ96BY7 2078 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 OTOGLQ3ZCN5 2332 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 ZNF202O95125 648 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 ABL1P00519 1130 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 IFNAR2P48551 515 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 PDE6CP51160 858 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 NOP14P78316 857 aaKnown RBP20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 AMPD2Q01433 879 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 GRSF1Q12849 480 aaKnown RBP eCLIP20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 CPA6Q8N4T0 437 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 TMC2Q8TDI7 906 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 OSCP1Q8WVF1 389 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 MED10Q9BTT4 135 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 TTLL2Q9BWV7 592 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 TMEM30AQ9NV96 361 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 TRAF3IP3Q9Y228 551 aa20.69■□□□□ 0.9
UBE2D3-215ENST00000503418 MYH10P35580 1976 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 WDR87Q6ZQQ6 2873 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 FRYLO94915 3013 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 P4HA1P13674 534 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 NR2F2P24468 414 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 PIK3CAP42336 1068 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 ID4P47928 161 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 SGSM1Q2NKQ1 1148 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 ZACNQ401N2 412 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 TMEM196Q5HYL7 178 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 SYNPOQ8N3V7 929 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 SECISBP2LQ93073 1101 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 ATP2A3Q93084 1043 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 CHFRQ96EP1 664 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 TNIP3Q96KP6 325 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 SDCBP2Q9H190 292 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 ECT2Q9H8V3 914 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 C2orf42Q9NWW7 574 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 ARHGAP26Q9UNA1 814 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 ATP8B3O60423 1300 aa20.68■□□□□ 0.9
UBE2D3-215ENST00000503418 CHURC1-FNTBB4DL54 471 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 TRDMT1O14717 391 aaKnown RBP20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 FNTBP49356 437 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 VAMP7P51809 220 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 DMWDQ09019 674 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 TAF10Q12962 218 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 HEATR6Q6AI08 1181 aaKnown RBP20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 FSTL4Q6MZW2 842 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 SV2AQ7L0J3 742 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 FAM35AQ86V20 835 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 SLITRK1Q96PX8 696 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.67■□□□□ 0.91e-7■■■■■ 61.1
UBE2D3-215ENST00000503418 RAB23Q9ULC3 237 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 SPTBN4Q9H254 2564 aa20.67■□□□□ 0.9
UBE2D3-215ENST00000503418 ZNF840PA6NDX5 716 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 K7ESF4 209 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 PFKLP17858 780 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 GJA4P35212 333 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 PPP3CCP48454 512 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 ORC1Q13415 861 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 LPAL2Q16609 132 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 EML3Q32P44 896 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 NAIF1Q69YI7 327 aaPredicted RBP20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 SPOPLQ6IQ16 392 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 PRR23BQ6ZRT6 265 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 ACOT1Q86TX2 421 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 NUP93Q8N1F7 819 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 CCDC34Q96HJ3 373 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 GPR179Q6PRD1 2367 aa20.66■□□□□ 0.9
UBE2D3-215ENST00000503418 ZNF292O60281 2723 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms