RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
SNCA-207ENST00000502987 CDH9Q9ULB4 789 aa11.47□□□□□ -0.57
SNCA-207ENST00000502987 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.47□□□□□ -0.57
SNCA-207ENST00000502987 DNAH14Q0VDD8 3507 aa11.47□□□□□ -0.57
SNCA-207ENST00000502987 GREB1Q4ZG55 1949 aa11.47□□□□□ -0.57
SNCA-207ENST00000502987 CACNA1AO00555 2505 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 SDK1Q7Z5N4 2213 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 PTPRJQ12913 1337 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.46□□□□□ -0.57
SNCA-207ENST00000502987 DCDC2BA2VCK2 349 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 TRDMT1O14717 391 aaKnown RBP11.46□□□□□ -0.57
SNCA-207ENST00000502987 AXIN1O15169 862 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 EIF3DO15371 548 aaKnown RBP eCLIP11.46□□□□□ -0.57
SNCA-207ENST00000502987 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.57
SNCA-207ENST00000502987 YEATS4O95619 227 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 EGFP01133 1207 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 CCDC192P0DO97 292 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 DRD1P21728 446 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 MAGEA11P43364 429 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 AFMP43652 599 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 ME1P48163 572 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 TNNC1P63316 161 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 ZNF268Q14587 947 aaPredicted RBP11.46□□□□□ -0.57
SNCA-207ENST00000502987 TMEM196Q5HYL7 178 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 MDH1BQ5I0G3 518 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 FSTL4Q6MZW2 842 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 FAM171BQ6P995 826 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 TRAPPC11Q7Z392 1133 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 WDR5BQ86VZ2 330 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 XXYLT1Q8NBI6 393 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 CXorf38Q8TB03 319 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 ZNF507Q8TCN5 953 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 ATP2A3Q93084 1043 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 MYRFLQ96LU7 910 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 SLC22A12Q96S37 553 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 PKMYT1Q99640 499 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 P2RY13Q9BPV8 354 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 BLZF1Q9H2G9 400 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 ECT2Q9H8V3 914 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 SEMA4GQ9NTN9 838 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 TRPM5Q9NZQ8 1165 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 PCDHGA10Q9Y5H3 936 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 WNT6Q9Y6F9 365 aa11.46□□□□□ -0.57
SNCA-207ENST00000502987 MYH10P35580 1976 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 C2orf78A6NCI8 922 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 OTOL1A6NHN0 477 aaPredicted RBP11.45□□□□□ -0.58
SNCA-207ENST00000502987 LRP3O75074 770 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 RNF40O75150 1001 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 CST3P01034 146 aaPredicted RBP11.45□□□□□ -0.58
SNCA-207ENST00000502987 WARSP23381 471 aaKnown RBP11.45□□□□□ -0.58
SNCA-207ENST00000502987 CASP1P29466 404 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 HOXC13P31276 330 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 GJA4P35212 333 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 HOXD13P35453 343 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 PDE6CP51160 858 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 IFRD2Q12894 506 aaPredicted RBP11.45□□□□□ -0.58
SNCA-207ENST00000502987 E2F4Q16254 413 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 WDR72Q3MJ13 1102 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 PKN3Q6P5Z2 889 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 SHC4Q6S5L8 630 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 VSTM1Q6UX27 236 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 DENND5BQ6ZUT9 1274 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 UNC13DQ70J99 1090 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 HSCBQ8IWL3 235 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 CEP57L1Q8IYX8 460 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 FAM160A2Q8N612 972 aaPredicted RBP11.45□□□□□ -0.58
SNCA-207ENST00000502987 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 SH3RF2Q8TEC5 729 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 OSCP1Q8WVF1 389 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 KBTBD7Q8WVZ9 684 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 CD101Q93033 1021 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 CHFRQ96EP1 664 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 C7orf25Q9BPX7 421 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 MRPL45Q9BRJ2 306 aaKnown RBP11.45□□□□□ -0.58
SNCA-207ENST00000502987 RTKNQ9BST9 563 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 SLC39A2Q9NP94 309 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 CRTAC1Q9NQ79 661 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 AGPAT3Q9NRZ7 376 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 EHD2Q9NZN4 543 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 NXF1Q9UBU9 619 aaKnown RBP11.45□□□□□ -0.58
SNCA-207ENST00000502987 SPAG17Q6Q759 2223 aa11.45□□□□□ -0.58
SNCA-207ENST00000502987 HELZP42694 1942 aaKnown RBP11.45□□□□□ -0.58
SNCA-207ENST00000502987 A8MXQ7 604 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 PPP1R3GB7ZBB8 358 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 TRIM66O15016 1216 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 EXOC3O60645 756 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 TADA3O75528 432 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 RPP40O75818 363 aaKnown RBP11.44□□□□□ -0.58
SNCA-207ENST00000502987 ZSCAN22P10073 491 aaPredicted RBP11.44□□□□□ -0.58
SNCA-207ENST00000502987 PTPN1P18031 435 aaKnown RBP11.44□□□□□ -0.58
SNCA-207ENST00000502987 TGM1P22735 817 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 SNRPFP62306 86 aaKnown RBP11.44□□□□□ -0.58
SNCA-207ENST00000502987 CYP24A1Q07973 514 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 BIRC3Q13489 604 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 PSMD6Q15008 389 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 ZNF77Q15935 545 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 CCDC6Q16204 474 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 CSRP2Q16527 193 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
SNCA-207ENST00000502987 FBXO43Q4G163 708 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms