RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 MTMR3Q13615 1198 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 CLEC20AQ6ZU45 233 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 DENND5BQ6ZUT9 1274 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 GAREM2Q75VX8 874 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 GET4Q7L5D6 327 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-228ENST00000498814 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 TDRD5Q8NAT2 981 aaKnown RBP16.48■□□□□ 0.23
CPNE1-228ENST00000498814 ANKRD52Q8NB46 1076 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 STKLD1Q8NE28 680 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 ZMIZ2Q8NF64 920 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 FGF13Q92913 245 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 TCEAL4Q96EI5 215 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 NAP1L5Q96NT1 182 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-228ENST00000498814 MYADMQ96S97 322 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 TTLL2Q9BWV7 592 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 GANQ9H2C0 597 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 EPS15L1Q9UBC2 864 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 CDH7Q9ULB5 785 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 FHOD1Q9Y613 1164 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 BDP1A6H8Y1 2624 aa16.48■□□□□ 0.23
CPNE1-228ENST00000498814 TTC28Q96AY4 2481 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 O00370 1275 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 FOXN3O00409 490 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-228ENST00000498814 TNFRSF10BO14763 440 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 TEX33O43247 280 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 F11P03951 625 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 LAMP2P13473 410 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 NPR3P17342 541 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 SP100P23497 879 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-228ENST00000498814 GABRR2P28476 465 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 CDC25CP30307 473 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 KLK7P49862 253 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 MAP3K7CLP57077 242 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 FANCCQ00597 558 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 STILQ15468 1287 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 CNGA2Q16280 664 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 LCLAT1Q6UWP7 414 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 FAM71AQ8IYT1 594 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 NUP93Q8N1F7 819 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 SHKBP1Q8TBC3 707 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 TFAP2BQ92481 460 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 NECAB3Q96P71 396 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-228ENST00000498814 UHRF1Q96T88 793 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-228ENST00000498814 STK33Q9BYT3 514 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 UBXN6Q9BZV1 441 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 PNPLA8Q9NP80 782 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 FAM207AQ9NSI2 230 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-228ENST00000498814 COMMD8Q9NX08 183 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 GDE1Q9NZC3 331 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 IL37Q9NZH6 218 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 HESX1Q9UBX0 185 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 TSPAN16Q9UKR8 245 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 MAGED2Q9UNF1 606 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-228ENST00000498814 VCANP13611 3396 aa16.47■□□□□ 0.23
CPNE1-228ENST00000498814 A0A1W2PRU2 124 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 NRG2O14511 850 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-228ENST00000498814 RTN3O95197 1032 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-228ENST00000498814 CEBPBP17676 345 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 USP46P62068 366 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 DRAP1Q14919 205 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-228ENST00000498814 NR1I3Q14994 352 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 GOLGA7BQ2TAP0 167 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 TMEM150AQ86TG1 271 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 TTC30AQ86WT1 665 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 GJD3Q8N144 294 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 NEK11Q8NG66 645 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 ING5Q8WYH8 240 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 PCMTD1Q96MG8 357 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-228ENST00000498814 GCNAQ96QF7 691 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 ZSWIM1Q9BR11 485 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 GPR88Q9GZN0 384 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 ATXN3LQ9H3M9 355 aa16.46■□□□□ 0.23
CPNE1-228ENST00000498814 A0A1W2PQC6 194 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 SOBPA7XYQ1 873 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 HHLA1C9JL84 531 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 EPHB6O15197 1021 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 GJA1P17302 382 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 BRD2P25440 801 aaKnown RBP16.45■□□□□ 0.22
CPNE1-228ENST00000498814 SSTR3P32745 418 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-228ENST00000498814 USP8P40818 1118 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 BCAT1P54687 386 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 SLC8A3P57103 927 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 POLR2FP61218 127 aaKnown RBP16.45■□□□□ 0.22
CPNE1-228ENST00000498814 TEAD2Q15562 447 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 PKDCCQ504Y2 493 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 POTEHQ6S545 545 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 CD320Q9NPF0 282 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 ZMYM5Q9UJ78 669 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.45■□□□□ 0.22
CPNE1-228ENST00000498814 NUP210Q8TEM1 1887 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-228ENST00000498814 MYO16Q9Y6X6 1858 aa16.45■□□□□ 0.22
CPNE1-228ENST00000498814 FAM92AA1XBS5 289 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 F8VZ95 297 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 CYP26A1O43174 497 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 MED7O43513 233 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 CALCAP01258 141 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 YWHAQP27348 245 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 GNA15P30679 374 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms