RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 RHOT2Q8IXI1 618 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 ESX1Q8N693 406 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 HSPBAP1Q96EW2 488 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 TSGA13Q96PP4 275 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 ACCSQ96QU6 501 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 TAAR1Q96RJ0 339 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 PAIP2Q9BPZ3 127 aaKnown RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 TTLL2Q9BWV7 592 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 TXLNGYQ9BZA5 131 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 FEM1BQ9UK73 627 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 PSME4Q14997 1843 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 ASTN2O75129 1339 aaPredicted RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 GOLGA6L10A0A0M3HER8 536 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 KIAA0391O15091 583 aaKnown RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 MEFVO15553 781 aaPredicted RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 CTNND1O60716 968 aaKnown RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 PQBP1O60828 265 aaKnown RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 PPFIA2O75334 1257 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 ICAM1P05362 532 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 MYCLP12524 364 aaPredicted RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 CNTFP26441 200 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 KCNJ1P48048 391 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 PPP2R2AP63151 447 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 GPC5P78333 572 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 SF3A3Q12874 501 aaKnown RBP eCLIP9.41□□□□□ -0.91e-13■□□□□ 8.5
FN1-227ENST00000498719 MORN1Q5T089 497 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 B4GALNT4Q76KP1 1039 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 FAM160B2Q86V87 743 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 GABPB2Q8TAK5 448 aaPredicted RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 ASB12Q8WXK4 309 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 CYFIP2Q96F07 1278 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 ZSWIM1Q9BR11 485 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 RAB17Q9H0T7 212 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 TMEM206Q9H813 350 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 GRHL1Q9NZI5 618 aa9.41□□□□□ -0.9
FN1-227ENST00000498719 NOCTQ9UK39 431 aaKnown RBP9.41□□□□□ -0.9
FN1-227ENST00000498719 KIAA1217Q5T5P2 1943 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 CCDC169A6NNP5 214 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 B3GALNT1O75752 331 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 PAX7P23759 505 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 PTGIRP43119 386 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 RECQLP46063 649 aaPredicted RBP9.4□□□□□ -0.9
FN1-227ENST00000498719 RPL21P46778 160 aaKnown RBP9.4□□□□□ -0.9
FN1-227ENST00000498719 CTCFP49711 727 aaPredicted RBP9.4□□□□□ -0.9
FN1-227ENST00000498719 PEX5P50542 639 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 PAPOLAP51003 745 aaKnown RBP9.4□□□□□ -0.9
FN1-227ENST00000498719 CETN1Q12798 172 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 SPRED3Q2MJR0 410 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 DEPTORQ8TB45 409 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 RAPGEF5Q92565 580 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 CENPIQ92674 756 aaPredicted RBP9.4□□□□□ -0.9
FN1-227ENST00000498719 PPP1R16BQ96T49 567 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 VPS11Q9H270 941 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 TRIM39Q9HCM9 518 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 TELO2Q9Y4R8 837 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 CAPN7Q9Y6W3 813 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 RPTORQ8N122 1335 aa9.4□□□□□ -0.9
FN1-227ENST00000498719 FER1L6Q2WGJ9 1857 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 GMNCA6NCL1 334 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 TRAPPC3O43617 180 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PCDHGA12O60330 932 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PHF2O75151 1096 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 RTN2O75298 545 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 KIAA0754O94854 1291 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 CCNE2O96020 404 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 CCDC159P0C7I6 412 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 BPIP17213 487 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 TIE1P35590 1138 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 RPS6P62753 249 aaKnown RBP9.4□□□□□ -0.91
FN1-227ENST00000498719 GTF2BQ00403 316 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 FOXK2Q01167 660 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 FMO1Q01740 532 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 SLC29A2Q14542 456 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PPP2R5DQ14738 602 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 SNRNP35Q16560 246 aaKnown RBP9.4□□□□□ -0.91
FN1-227ENST00000498719 C2CD6Q53TS8 623 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 CCDC137Q6PK04 289 aaKnown RBP9.4□□□□□ -0.91
FN1-227ENST00000498719 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 OTUD6AQ7L8S5 288 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PHLDB2Q86SQ0 1253 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 NLRP8Q86W28 1048 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 FAM71AQ8IYT1 594 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 RTKN2Q8IZC4 609 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 ARFGAP2Q8N6H7 521 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 SYTL5Q8TDW5 730 aaPredicted RBP9.4□□□□□ -0.91
FN1-227ENST00000498719 USP7Q93009 1102 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 NAP1L3Q99457 506 aaPredicted RBP9.4□□□□□ -0.91
FN1-227ENST00000498719 NUP85Q9BW27 656 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 SEMA4AQ9H3S1 761 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 IFT22Q9H7X7 185 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 ABCF3Q9NUQ8 709 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PCDHGA9Q9Y5G4 932 aaKnown RBP9.4□□□□□ -0.91
FN1-227ENST00000498719 PCDHGA8Q9Y5G5 932 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PCDHGA7Q9Y5G6 932 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PCDHGA6Q9Y5G7 932 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PCDHGA3Q9Y5H0 932 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 PCDHGA2Q9Y5H1 932 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 UBIAD1Q9Y5Z9 338 aa9.4□□□□□ -0.91
FN1-227ENST00000498719 C17orf113A0A1B0GUU1 675 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms