RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CCDC26Q8TAB7 109 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 OLIG1Q8TAK6 271 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 SPATA18Q8TC71 538 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 CACTINQ8WUQ7 758 aaKnown RBP15.74■□□□□ 0.11
TRAF4-212ENST00000498540 RLN3Q8WXF3 142 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 GATA6Q92908 595 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 EPSTI1Q96J88 318 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 SCNM1Q9BWG6 230 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 WDFY3Q8IZQ1 3526 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 SCAMP3O14828 347 aaKnown RBP15.73■□□□□ 0.11
TRAF4-212ENST00000498540 LMO2P25791 158 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 SF3A1Q15459 793 aaKnown RBP15.73■□□□□ 0.11
TRAF4-212ENST00000498540 LMBRD2Q68DH5 695 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-212ENST00000498540 ARMCX6Q7L4S7 300 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 FILIP1Q7Z7B0 1213 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 ALLCQ8N6M5 410 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 FRMD1Q8N878 549 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 NOC3LQ8WTT2 800 aaKnown RBP15.73■□□□□ 0.11
TRAF4-212ENST00000498540 KBTBD7Q8WVZ9 684 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 MYLPFQ96A32 169 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 ACCSQ96QU6 501 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 FNBP1Q96RU3 617 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 SYT15Q9BQS2 421 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 CBWD1Q9BRT8 395 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 FGFBP2Q9BYJ0 223 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 PDE11AQ9HCR9 933 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 CRTAC1Q9NQ79 661 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 EXOC7Q9UPT5 735 aa15.73■□□□□ 0.11
TRAF4-212ENST00000498540 PTPRJQ12913 1337 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 PKD1L2Q7Z442 2459 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 MYMKA6NI61 221 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 GCNT3O95395 438 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 CD2BP2O95400 341 aaKnown RBP15.72■□□□□ 0.11
TRAF4-212ENST00000498540 BMP15O95972 392 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 GARTP22102 1010 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 BDNFP23560 247 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 PI4KAP42356 2102 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 PTGER3P43115 390 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 SLC6A11P48066 632 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 PDE6CP51160 858 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 RBP5P82980 135 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 COL9A2Q14055 689 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-212ENST00000498540 TRIM61Q5EBN2 209 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 KIAA1211LQ6NV74 962 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 C4orf50Q6ZRC1 276 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 LIMS2Q7Z4I7 341 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 C12orf40Q86WS4 652 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 IL17RCQ8NAC3 791 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 DNAJC19Q96DA6 116 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 SPATA17Q96L03 361 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 RNF38Q9H0F5 515 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 TMEM74BQ9NUR3 256 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 MAGEC2Q9UBF1 373 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-212ENST00000498540 SEL1LQ9UBV2 794 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 EVLQ9UI08 416 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-212ENST00000498540 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-212ENST00000498540 ADAMTS9Q9P2N4 1935 aa15.72■□□□□ 0.11
TRAF4-212ENST00000498540 ATXN2Q99700 1313 aaKnown RBP15.71■□□□□ 0.11
TRAF4-212ENST00000498540 CEP192Q8TEP8 1941 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 TMEM8BA6NDV4 472 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 SGK1O00141 431 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 KLF8O95600 359 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-212ENST00000498540 LDHAP00338 332 aaKnown RBP15.71■□□□□ 0.11
TRAF4-212ENST00000498540 TMEM191BP0C7N4 346 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 TIE1P35590 1138 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 GRIK1P39086 918 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 P2RY2P41231 377 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 MAPK8P45983 427 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 SLC7A9P82251 487 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 MRPS21P82921 87 aaKnown RBP15.71■□□□□ 0.11
TRAF4-212ENST00000498540 DHCR24Q15392 516 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 VSTM1Q6UX27 236 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 DENND5BQ6ZUT9 1274 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 TMEFF1Q8IYR6 380 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 ADGRG2Q8IZP9 1017 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 TXNDC5Q8NBS9 432 aaKnown RBP15.71■□□□□ 0.11
TRAF4-212ENST00000498540 PCIF1Q9H4Z3 704 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 ZDHHC4Q9NPG8 344 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 SMPD4Q9NXE4 827 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 TRPM5Q9NZQ8 1165 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 STK17AQ9UEE5 414 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 MBD1Q9UIS9 605 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-212ENST00000498540 CDH9Q9ULB4 789 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 CPQQ9Y646 472 aa15.71■□□□□ 0.11
TRAF4-212ENST00000498540 GON4LQ3T8J9 2241 aa15.71■□□□□ 0.1
TRAF4-212ENST00000498540 CACNA1EQ15878 2313 aa15.71■□□□□ 0.1
TRAF4-212ENST00000498540 ZNF840PA6NDX5 716 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 SRRM3A6NNA2 597 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-212ENST00000498540 ALDH1A2O94788 518 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 OLFM2O95897 454 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 PDGFRBP09619 1106 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 GAP43P17677 238 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 PFKLP17858 780 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 CYP27A1Q02318 531 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 KDSRQ06136 332 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 LMAN2Q12907 356 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 RABEP1Q15276 862 aa15.7■□□□□ 0.1
TRAF4-212ENST00000498540 EMC10Q5UCC4 262 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms