RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ADGRF2Q8IZF7 708 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 PGBD3Q8N328 593 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 HDDC3Q8N4P3 179 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 CSGALNACT2Q8N6G5 542 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 FRMD1Q8N878 549 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 C1orf127Q8N9H9 656 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 SPATA18Q8TC71 538 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 CACTINQ8WUQ7 758 aaKnown RBP14.93□□□□□ -0.02
CCDC58-207ENST00000498466 ST6GALNAC4Q9H4F1 302 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 KIF3AQ9Y496 699 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 KIAA1549LQ6ZVL6 1849 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 TCHHQ07283 1943 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 NUP205Q92621 2012 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 ABCA7Q8IZY2 2146 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 MYO16Q9Y6X6 1858 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 THADAQ6YHU6 1953 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 SGK1O00141 431 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 APODP05090 189 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 CYP17A1P05093 508 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 CFIP05156 583 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 ADSSP30520 456 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 DPP6P42658 865 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 SLC6A11P48066 632 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 WNT7BP56706 349 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 BYSLQ13895 437 aaKnown RBP14.92□□□□□ -0.02
CCDC58-207ENST00000498466 EOGTQ5NDL2 527 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 SLC23A3Q6PIS1 610 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 C4orf50Q6ZRC1 276 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 SFTPA1Q8IWL2 248 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 LRRC52Q8N7C0 313 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 KRI1Q8N9T8 703 aaKnown RBP14.92□□□□□ -0.02
CCDC58-207ENST00000498466 IL17RCQ8NAC3 791 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 HMGB4Q8WW32 186 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 PNKPQ96T60 521 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 GTPBP2Q9BX10 602 aaKnown RBP14.92□□□□□ -0.02
CCDC58-207ENST00000498466 FSCN3Q9NQT6 498 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 GDAP2Q9NXN4 497 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 TRPM5Q9NZQ8 1165 aa14.92□□□□□ -0.02
CCDC58-207ENST00000498466 MAGEC2Q9UBF1 373 aaPredicted RBP14.92□□□□□ -0.02
CCDC58-207ENST00000498466 MBD1Q9UIS9 605 aaPredicted RBP14.92□□□□□ -0.02
CCDC58-207ENST00000498466 H0Y626 953 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 SCAMP3O14828 347 aaKnown RBP14.91□□□□□ -0.02
CCDC58-207ENST00000498466 KAT7O95251 611 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 TRIM16O95361 564 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 SEC24BO95487 1268 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 PFKLP17858 780 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 ITPKAP23677 461 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 GRIK1P39086 918 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 MAGEA11P43364 429 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 RESTQ13127 1097 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 SEMA3BQ13214 749 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 DHCR24Q15392 516 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 HSF5Q4G112 596 aaPredicted RBP14.91□□□□□ -0.02
CCDC58-207ENST00000498466 SPDYCQ5MJ68 293 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 SCARA3Q6AZY7 606 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 DENND5BQ6ZUT9 1274 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 ZNF720Q7Z2F6 126 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 PIP4P1Q86T03 277 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 SFR1Q86XK3 245 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 BRSK2Q8IWQ3 736 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 ADGRG2Q8IZP9 1017 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 TOP6BLQ8N6T0 577 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 LARP4BQ92615 738 aaKnown RBP14.91□□□□□ -0.02
CCDC58-207ENST00000498466 HVCN1Q96D96 273 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 SAAL1Q96ER3 474 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 ZDHHC4Q9NPG8 344 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 SMPD4Q9NXE4 827 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 RBAKQ9NYW8 714 aaPredicted RBP14.91□□□□□ -0.02
CCDC58-207ENST00000498466 PILRBQ9UKJ0 227 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 ITGA11Q9UKX5 1188 aa14.91□□□□□ -0.02
CCDC58-207ENST00000498466 R3HCC1Q9Y3T6 440 aaKnown RBP14.91□□□□□ -0.02
CCDC58-207ENST00000498466 LOC400499M0QZD8 3231 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 TCRBV21S2A2A0A5A6 115 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 UPK3BL1B0FP48 263 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 UPK3BL2E5RIL1 263 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 H3BQV1 296 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 SLC9A3R1O14745 358 aaPredicted RBP14.9□□□□□ -0.02
CCDC58-207ENST00000498466 GABRDO14764 452 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 ATP2C2O75185 946 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 ABL1P00519 1130 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 BDNFP23560 247 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 ANXA13P27216 316 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 EIF2DP41214 584 aaKnown RBP14.9□□□□□ -0.02
CCDC58-207ENST00000498466 USP46P62068 366 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 PSMC1P62191 440 aaKnown RBP14.9□□□□□ -0.02
CCDC58-207ENST00000498466 RBP5P82980 135 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 CYP27A1Q02318 531 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 KDSRQ06136 332 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 GFPT1Q06210 699 aaPredicted RBP14.9□□□□□ -0.02
CCDC58-207ENST00000498466 MESP2Q0VG99 397 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 MAP7D1Q3KQU3 841 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 EMC10Q5UCC4 262 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 FAM171BQ6P995 826 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 VSTM1Q6UX27 236 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 DYMQ7RTS9 669 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 ZSWIM2Q8NEG5 633 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 CEP76Q8TAP6 659 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 NOC3LQ8WTT2 800 aaKnown RBP14.9□□□□□ -0.02
CCDC58-207ENST00000498466 MYLPFQ96A32 169 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 FAM84AQ96KN4 292 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms