RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 TBC1D15Q8TC07 691 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 RNF125Q96EQ8 232 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 AJUBAQ96IF1 538 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 IL23AQ9NPF7 189 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 FSCN3Q9NQT6 498 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 NDUFAF4Q9P032 175 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 KCND3Q9UK17 655 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 CYP46A1Q9Y6A2 500 aa9.26□□□□□ -0.93
SNX13-212ENST00000498463 SYNDIG1LA6NDD5 238 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 ADAM23O75077 832 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 CSF1P09603 554 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 ABCD3P28288 659 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 GALNSP34059 522 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 STAT1P42224 750 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 NPTX2P47972 431 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 KCNC1P48547 511 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 KRT17Q04695 432 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 GALNT2Q10471 571 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 BOP1Q14137 746 aaKnown RBP9.25□□□□□ -0.93
SNX13-212ENST00000498463 USP10Q14694 798 aaKnown RBP9.25□□□□□ -0.93
SNX13-212ENST00000498463 IGDCC3Q8IVU1 814 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 MZB1Q8WU39 189 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 TBC1D22AQ8WUA7 517 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 CPT1BQ92523 772 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 PWWP2AQ96N64 755 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 GHITMQ9H3K2 345 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 TBC1D29Q9UFV1 150 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 SHOC2Q9UQ13 582 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 CNTN6Q9UQ52 1028 aa9.25□□□□□ -0.93
SNX13-212ENST00000498463 STX16-NPEPL1H3BU86 382 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 STX16O14662 325 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 DHHO43323 396 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 TFRCP02786 760 aaKnown RBP9.24□□□□□ -0.93
SNX13-212ENST00000498463 RPN1P04843 607 aaKnown RBP9.24□□□□□ -0.93
SNX13-212ENST00000498463 SLC6A2P23975 617 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 SERPINA4P29622 427 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 CSF2RBP32927 897 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 LIMS1P48059 325 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 MCM2P49736 904 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 DLG4P78352 724 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 TBR1Q16650 682 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 ZIK1Q3SY52 487 aaPredicted RBP9.24□□□□□ -0.93
SNX13-212ENST00000498463 GALNTL6Q49A17 601 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 TMCO3Q6UWJ1 677 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 ADGRE4PQ86SQ3 457 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 FITM2Q8N6M3 262 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 USP38Q8NB14 1042 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 BPIFB1Q8TDL5 484 aa9.24□□□□□ -0.93
SNX13-212ENST00000498463 MBD1Q9UIS9 605 aaPredicted RBP9.24□□□□□ -0.93
SNX13-212ENST00000498463 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
SNX13-212ENST00000498463 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 PNMA6EA0A0J9YXQ4 647 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 VWA3AA6NCI4 1184 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 TSPAN3O60637 253 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 MCCP23508 829 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 GSK3AP49840 483 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 TOB1P50616 345 aaPredicted RBP9.23□□□□□ -0.93
SNX13-212ENST00000498463 ARF3P61204 181 aaPredicted RBP9.23□□□□□ -0.93
SNX13-212ENST00000498463 ARF1P84077 181 aaKnown RBP9.23□□□□□ -0.93
SNX13-212ENST00000498463 BMT2Q1RMZ1 405 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 FAM214AQ32MH5 1076 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 ZMAT1Q5H9K5 638 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 R3HCC1LQ7Z5L2 792 aaKnown RBP9.23□□□□□ -0.93
SNX13-212ENST00000498463 ARMC8Q8IUR7 673 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 TMEFF1Q8IYR6 380 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 FNIP1Q8TF40 1166 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 WDR60Q8WVS4 1066 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 NELL1Q92832 810 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 YTHDC1Q96MU7 727 aaKnown RBP9.23□□□□□ -0.93
SNX13-212ENST00000498463 RSPH9Q9H1X1 276 aaPredicted RBP9.23□□□□□ -0.93
SNX13-212ENST00000498463 ALDH8A1Q9H2A2 487 aaPredicted RBP9.23□□□□□ -0.93
SNX13-212ENST00000498463 ETAA1Q9NY74 926 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 VPS28Q9UK41 221 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 HSF4Q9ULV5 492 aa9.23□□□□□ -0.93
SNX13-212ENST00000498463 EFCAB8A8MWE9 144 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 B4DLN1 442 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 SRGAP2O75044 1071 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 RPP40O75818 363 aaKnown RBP9.22□□□□□ -0.93
SNX13-212ENST00000498463 GLI1P08151 1106 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
SNX13-212ENST00000498463 ATXN1LP0C7T5 689 aaKnown RBP9.22□□□□□ -0.93
SNX13-212ENST00000498463 AKR1B1P15121 316 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 ALOX12P18054 663 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 RBM5P52756 815 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNX13-212ENST00000498463 CTXN3Q4LDR2 81 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 ZMYM1Q5SVZ6 1142 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 CFAP58Q5T655 872 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 TMTC3Q6ZXV5 915 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 TLR10Q9BXR5 811 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 EPC1Q9H2F5 836 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 UNKLQ9H9P5 680 aaKnown RBP9.22□□□□□ -0.93
SNX13-212ENST00000498463 SH3GLB2Q9NR46 395 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 HAUS2Q9NVX0 235 aa9.22□□□□□ -0.93
SNX13-212ENST00000498463 TBKBP1A7MCY6 615 aa9.21□□□□□ -0.94
SNX13-212ENST00000498463 POLRMTO00411 1230 aaKnown RBP9.21□□□□□ -0.94
SNX13-212ENST00000498463 ZSCAN9O15535 394 aaPredicted RBP9.21□□□□□ -0.94
SNX13-212ENST00000498463 RGS10O43665 173 aa9.21□□□□□ -0.94
SNX13-212ENST00000498463 ADAMTS4O75173 837 aa9.21□□□□□ -0.94
SNX13-212ENST00000498463 TAF5LO75529 589 aa9.21□□□□□ -0.94
SNX13-212ENST00000498463 STC2O76061 302 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms