RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 TAS1R1Q7RTX1 841 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.46□□□□□ -1.06
VPS45-210ENST00000497638 GRASPQ7Z6J2 395 aaPredicted RBP8.46□□□□□ -1.06
VPS45-210ENST00000497638 PALB2Q86YC2 1186 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 IRF2BP1Q8IU81 584 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 COLGALT2Q8IYK4 626 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 ZNF713Q8N859 430 aaPredicted RBP8.46□□□□□ -1.06
VPS45-210ENST00000497638 DNASE1L2Q92874 299 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 CRELD1Q96HD1 420 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 TMEM74Q96NL1 305 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 KXD1Q9BQD3 176 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 FDXACB1Q9BRP7 624 aaPredicted RBP8.46□□□□□ -1.06
VPS45-210ENST00000497638 UBN1Q9NPG3 1134 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 CHST7Q9NS84 486 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 AGPAT5Q9NUQ2 364 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 FBXW11Q9UKB1 542 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 SPAG17Q6Q759 2223 aa8.46□□□□□ -1.06
VPS45-210ENST00000497638 SETXQ7Z333 2677 aaKnown RBP8.46□□□□□ -1.06
VPS45-210ENST00000497638 GREB1Q4ZG55 1949 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 TMEM8BA6NDV4 472 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 CCDC69A6NI79 296 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 ECI2O75521 394 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 HTR3BO95264 441 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 POMCP01189 267 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 CYP3A4P08684 503 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 OR1G1P47890 313 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 CHRNEQ04844 493 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 DSC1Q08554 894 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 DRP2Q13474 957 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 PWP1Q13610 501 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 NR0B2Q15466 257 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 TARBP2Q15633 366 aaKnown RBP8.45□□□□□ -1.06
VPS45-210ENST00000497638 USP41Q3LFD5 358 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 AASDHQ4L235 1098 aaPredicted RBP8.45□□□□□ -1.06
VPS45-210ENST00000497638 UNQ6494/PRO21346Q6UXR6 183 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 CNNM3Q8NE01 707 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 CRYGNQ8WXF5 182 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 KIF2CQ99661 725 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 COLEC11Q9BWP8 271 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 IL25Q9H293 177 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 VTI1BQ9UEU0 232 aa8.45□□□□□ -1.06
VPS45-210ENST00000497638 IGKV6-21A0A0C4DH24 114 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 SHISA3A0PJX4 238 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 SH2B2O14492 632 aaPredicted RBP8.44□□□□□ -1.06
VPS45-210ENST00000497638 NCLP19338 710 aaKnown RBP8.44□□□□□ -1.06
VPS45-210ENST00000497638 RXRAP19793 462 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 LIFRP42702 1097 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 NTHL1P78549 312 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 PPM1LQ5SGD2 360 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 FUT10Q6P4F1 479 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 ANKS4BQ8N8V4 417 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 GOLM1Q8NBJ4 401 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 INTS4Q96HW7 963 aaKnown RBP8.44□□□□□ -1.06
VPS45-210ENST00000497638 RHOVQ96L33 236 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 JPH2Q9BR39 696 aaPredicted RBP8.44□□□□□ -1.06
VPS45-210ENST00000497638 RSRP1Q9BUV0 290 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 HEBP1Q9NRV9 189 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 SUCLA2Q9P2R7 463 aaPredicted RBP8.44□□□□□ -1.06
VPS45-210ENST00000497638 POLR3KQ9Y2Y1 108 aaPredicted RBP8.44□□□□□ -1.06
VPS45-210ENST00000497638 TAF6LQ9Y6J9 622 aa8.44□□□□□ -1.06
VPS45-210ENST00000497638 TDRD15B5MCY1 1934 aaKnown RBP8.43□□□□□ -1.06
VPS45-210ENST00000497638 SMCO2A6NFE2 343 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 SHISA7A6NL88 538 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 PRC1O43663 620 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 PAPSS2O95340 614 aaPredicted RBP8.43□□□□□ -1.06
VPS45-210ENST00000497638 ITGA4P13612 1032 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 RPL17P18621 184 aaKnown RBP8.43□□□□□ -1.06
VPS45-210ENST00000497638 SFNP31947 248 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 MCM5P33992 734 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 CXCL12P48061 93 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 JAK3P52333 1124 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 MPP2Q14168 576 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 MTERF2Q49AM1 385 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 PABPC1LQ4VXU2 614 aaKnown RBP8.43□□□□□ -1.06
VPS45-210ENST00000497638 XKR3Q5GH77 459 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 UBXN11Q5T124 520 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 SRGAP1Q7Z6B7 1085 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 LONP2Q86WA8 852 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 RHPN2Q8IUC4 686 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 FANCBQ8NB91 859 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 ITFG1Q8TB96 612 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 RUFY2Q8WXA3 655 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 MAP4K1Q92918 833 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 B3GALT6Q96L58 329 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 NLRP4Q96MN2 994 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 BARHL2Q9NY43 387 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 GDE1Q9NZC3 331 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 ADAM28Q9UKQ2 775 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 NDRG2Q9UN36 371 aaKnown RBP8.43□□□□□ -1.06
VPS45-210ENST00000497638 SLC12A7Q9Y666 1083 aa8.43□□□□□ -1.06
VPS45-210ENST00000497638 DSPP15924 2871 aaKnown RBP8.43□□□□□ -1.06
VPS45-210ENST00000497638 NOTCH4Q99466 2003 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 ARL5CA6NH57 179 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 KRTAP9-7A8MTY7 169 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 F8W810 466 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 CCL16O15467 120 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 MAFO75444 373 aaPredicted RBP8.42□□□□□ -1.06
VPS45-210ENST00000497638 KCNK5O95279 499 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 ZNF806P0C7X5 589 aa8.42□□□□□ -1.06
VPS45-210ENST00000497638 HOXA11P31270 313 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms