RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 TUBBP07437 444 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 GLI1P08151 1106 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 GPD1P21695 349 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 FGFR3P22607 806 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 PSMA2P25787 234 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 CXCR5P32302 372 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 GATMP50440 423 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 WDR5P61964 334 aaKnown RBP12.81□□□□□ -0.36
HPS1-213ENST00000497527 RPL7AP62424 266 aaKnown RBP12.81□□□□□ -0.36
HPS1-213ENST00000497527 FAM171A1Q5VUB5 890 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 LLGL2Q6P1M3 1020 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 PSRC1Q6PGN9 363 aaPredicted RBP12.81□□□□□ -0.36
HPS1-213ENST00000497527 CLEC20AQ6ZU45 233 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 FAM183BPQ6ZVS7 135 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 SLC26A9Q7LBE3 791 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 SPATA2LQ8IUW3 424 aaPredicted RBP12.81□□□□□ -0.36
HPS1-213ENST00000497527 SIX6OS1Q8N1H7 587 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 RASGEF1CQ8N431 466 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 MAIP1Q8WWC4 291 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 FUBP3Q96I24 572 aaKnown RBP eCLIP12.81□□□□□ -0.36
HPS1-213ENST00000497527 BTBD6Q96KE9 485 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 PSMB7Q99436 277 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
HPS1-213ENST00000497527 TRIM62Q9BVG3 475 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 DMAP1Q9NPF5 467 aaPredicted RBP12.81□□□□□ -0.36
HPS1-213ENST00000497527 MARCH5Q9NX47 278 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 DDX56Q9NY93 547 aaKnown RBP12.81□□□□□ -0.36
HPS1-213ENST00000497527 STK39Q9UEW8 545 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 PTPRSQ13332 1948 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 KIAA1671Q9BY89 1806 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 CENPFP49454 3210 aa12.81□□□□□ -0.36
HPS1-213ENST00000497527 GOLGA6L10A0A0M3HER8 536 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 DPYSL4O14531 572 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 ZNF185O15231 689 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 PAPSS1O43252 624 aaPredicted RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 KRT7P08729 469 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 LAG3P18627 525 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 EN2P19622 333 aaPredicted RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 IGFBP6P24592 240 aaPredicted RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 TKTP29401 623 aaKnown RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 SDC4P31431 198 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 RFC1P35251 1148 aaPredicted RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 BCAR1P56945 870 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 FPGSQ05932 587 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 ODF2Q5BJF6 829 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 TEX35Q5T0J7 233 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 SPOUT1Q5T280 376 aaKnown RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 KIAA0319Q5VV43 1072 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 CC2D1AQ6P1N0 951 aaPredicted RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 OLFML1Q6UWY5 402 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 PAQR9Q6ZVX9 377 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 ANKS3Q6ZW76 656 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 POLNQ7Z5Q5 900 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 KATNAL2Q8IYT4 538 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 C2orf15Q8WU43 125 aaKnown RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 RNPC3Q96LT9 517 aaKnown RBP12.8□□□□□ -0.36
HPS1-213ENST00000497527 ZNF558Q96NG5 402 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 PKMYT1Q99640 499 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 RTP3Q9BQQ7 232 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 CNPY3Q9BT09 278 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 HTATIP2Q9BUP3 242 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 ZCWPW1Q9H0M4 648 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 CSNK1G1Q9HCP0 422 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 CNGB3Q9NQW8 809 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 AAASQ9NRG9 546 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 PCNTO95613 3336 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 MYO16Q9Y6X6 1858 aa12.8□□□□□ -0.36
HPS1-213ENST00000497527 HSF2BPO75031 334 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 FGBP02675 491 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 LCP1P13796 627 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 ITGB8P26012 769 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 PCK1P35558 622 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 PPM1AP35813 382 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 SSR1P43307 286 aaKnown RBP12.79□□□□□ -0.36
HPS1-213ENST00000497527 PTPN9P43378 593 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 PEX5P50542 639 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 ZNF143P52747 638 aaPredicted RBP12.79□□□□□ -0.36
HPS1-213ENST00000497527 MAP3K7CLP57077 242 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 ADIGQ0VDE8 80 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 MRPL58Q14197 206 aaKnown RBP12.79□□□□□ -0.36
HPS1-213ENST00000497527 BTG3Q14201 252 aaPredicted RBP12.79□□□□□ -0.36
HPS1-213ENST00000497527 PTPROQ16827 1216 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 USP41Q3LFD5 358 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 VSTM1Q6UX27 236 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 RSRC2Q7L4I2 434 aaKnown RBP12.79□□□□□ -0.36
HPS1-213ENST00000497527 SCML4Q8N228 414 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 MMGT1Q8N4V1 131 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 SPATA4Q8NEY3 305 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 OR10T2Q8NGX3 314 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 JOSD2Q8TAC2 188 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 ZNF689Q96CS4 500 aaPredicted RBP12.79□□□□□ -0.36
HPS1-213ENST00000497527 VWCEQ96DN2 955 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 RBM41Q96IZ5 413 aaKnown RBP12.79□□□□□ -0.36
HPS1-213ENST00000497527 LPIN3Q9BQK8 851 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 TTPALQ9BTX7 342 aa12.79□□□□□ -0.36
HPS1-213ENST00000497527 MTIF3Q9H2K0 278 aaKnown RBP12.79□□□□□ -0.36
HPS1-213ENST00000497527 TJP2Q9UDY2 1190 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms