RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 KLRC4O43908 158 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 TACC1O75410 805 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 PFKFB1P16118 471 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 PTPN1P18031 435 aaKnown RBP13.81□□□□□ -0.2
FN1-226ENST00000496542 AMPD2Q01433 879 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 STK4Q13043 487 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 SIM2Q14190 667 aaPredicted RBP13.81□□□□□ -0.2
FN1-226ENST00000496542 RSPO4Q2I0M5 234 aaPredicted RBP13.81□□□□□ -0.2
FN1-226ENST00000496542 TMEM196Q5HYL7 178 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 LAIR1Q6GTX8 287 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 SCARA5Q6ZMJ2 495 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 DENND5BQ6ZUT9 1274 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 DGLUCYQ7Z3D6 616 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 LONP2Q86WA8 852 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
FN1-226ENST00000496542 KIAA0895Q8NCT3 520 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 PLEKHO2Q8TD55 490 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 SH3RF2Q8TEC5 729 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 OSCP1Q8WVF1 389 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 ATP2A3Q93084 1043 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 SYAP1Q96A49 352 aaPredicted RBP13.81□□□□□ -0.2
FN1-226ENST00000496542 CHAMP1Q96JM3 812 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 SMYD3Q9H7B4 428 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 TRPM5Q9NZQ8 1165 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 GCNT4Q9P109 453 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 MYH10P35580 1976 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 LRRIQ3A6PVS8 624 aaPredicted RBP13.8□□□□□ -0.2
FN1-226ENST00000496542 A8MXQ7 604 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 TRDMT1O14717 391 aaKnown RBP13.8□□□□□ -0.2
FN1-226ENST00000496542 HRO43593 1189 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 STAU1O95793 577 aaKnown RBP13.8□□□□□ -0.2
FN1-226ENST00000496542 EGFP01133 1207 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 HDCP19113 662 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 ATICP31939 592 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 GJA4P35212 333 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 PDE6CP51160 858 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 CACNA2D1P54289 1103 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 IFRD2Q12894 506 aaPredicted RBP13.8□□□□□ -0.2
FN1-226ENST00000496542 PUM1Q14671 1186 aaKnown RBP eCLIP13.8□□□□□ -0.2
FN1-226ENST00000496542 ZNF699Q32M78 642 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 KMT5BQ4FZB7 885 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 TDRD10Q5VZ19 366 aaKnown RBP13.8□□□□□ -0.2
FN1-226ENST00000496542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.8□□□□□ -0.2
FN1-226ENST00000496542 B3GALNT2Q8NCR0 500 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 ELMO3Q96BJ8 720 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 C8orf48Q96LL4 319 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 CEP295NLQ96MC4 621 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 P2RY13Q9BPV8 354 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 ZNF518BQ9C0D4 1074 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 ELOVL4Q9GZR5 314 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 XYLT2Q9H1B5 865 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 PARD6AQ9NPB6 346 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 EHD2Q9NZN4 543 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 ARHGAP26Q9UNA1 814 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 MYO16Q9Y6X6 1858 aa13.8□□□□□ -0.2
FN1-226ENST00000496542 CLDN5O00501 218 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 RNF40O75150 1001 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 ABL1P00519 1130 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 FAM163BP0C2L3 166 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 CMA1P23946 247 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 RAP1GAPP47736 663 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 PXNP49023 591 aaPredicted RBP13.79□□□□□ -0.2
FN1-226ENST00000496542 KRT85P78386 507 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 LMNB2Q03252 620 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 SPEM2Q0P670 501 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 NCOA4Q13772 614 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 EML3Q32P44 896 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 ZNF667Q5HYK9 610 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 CEP68Q76N32 757 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 PARD3BQ8TEW8 1205 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 EXOC4Q96A65 974 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 SPATA32Q96LK8 384 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 TTLL2Q9BWV7 592 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 B3GNT5Q9BYG0 378 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 FBRSL1Q9HCM7 1045 aaKnown RBP13.79□□□□□ -0.2
FN1-226ENST00000496542 TMEM30AQ9NV96 361 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
FN1-226ENST00000496542 SLC8A2Q9UPR5 921 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 MYOFQ9NZM1 2061 aa13.79□□□□□ -0.2
FN1-226ENST00000496542 ZNF840PA6NDX5 716 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 LEFTY2O00292 366 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 ATG13O75143 517 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 NR3C1P04150 777 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 RETP07949 1114 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 DRD1P21728 446 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 TGM1P22735 817 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 HOXA6P31267 233 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 CNR2P34972 360 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 GALK1P51570 392 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 AP3M2P53677 418 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 CDH8P55286 799 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 NOP14P78316 857 aaKnown RBP13.78□□□□□ -0.2
FN1-226ENST00000496542 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
FN1-226ENST00000496542 TAF10Q12962 218 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 PSMD2Q13200 908 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 WDR5BQ86VZ2 330 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 SLITRK1Q96PX8 696 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 MED10Q9BTT4 135 aa13.78□□□□□ -0.2
FN1-226ENST00000496542 LINC00597Q9H2U6 94 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms