RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 CYP2J2P51589 502 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 PSMD2Q13200 908 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 KCNB1Q14721 858 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 MTF1Q14872 753 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 CCDC6Q16204 474 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 E2F4Q16254 413 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 TMEM196Q5HYL7 178 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 SYNPOQ8N3V7 929 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 FAM160A2Q8N612 972 aaPredicted RBP11.65□□□□□ -0.54
RNF220-217ENST00000496262 KBTBD7Q8WVZ9 684 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 CCDC127Q96BQ5 260 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 CHFRQ96EP1 664 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 TRIM9Q9C026 710 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 TRIM5Q9C035 493 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 LRRC27Q9C0I9 530 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 CRTAC1Q9NQ79 661 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 SEMA4GQ9NTN9 838 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 DUS2Q9NX74 493 aaKnown RBP11.65□□□□□ -0.54
RNF220-217ENST00000496262 SLC8A2Q9UPR5 921 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 KIF26AQ9ULI4 1882 aaPredicted RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 GABRDO14764 452 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 KIAA0391O15091 583 aaKnown RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 USP17L7P0C7H9 530 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 TNNI1P19237 187 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 SDHBP21912 280 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 ANXA13P27216 316 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 CNR2P34972 360 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 HOXD13P35453 343 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 IFNAR2P48551 515 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 GALK1P51570 392 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 FAM160A1Q05DH4 1040 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 IFRD2Q12894 506 aaPredicted RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 PDGFRLQ15198 375 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 SURF1Q15526 300 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 SNRNP35Q16560 246 aaKnown RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 STX1AQ16623 288 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 DUOXA2Q1HG44 320 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 CFAP221Q4G0U5 840 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 MDH1BQ5I0G3 518 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 FAM26FQ5R3K3 315 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 C4orf50Q6ZRC1 276 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 HS2ST1Q7LGA3 356 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 CCDC186Q7Z3E2 898 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 WDR5BQ86VZ2 330 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 WDR49Q8IV35 697 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 CPA6Q8N4T0 437 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 ARL14EPQ8N8R7 260 aaPredicted RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 FSIP1Q8NA03 581 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 TRMT2BQ96GJ1 504 aaKnown RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 ZNF396Q96N95 335 aaPredicted RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 HHIPQ96QV1 700 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 FNBP1Q96RU3 617 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 P2RY13Q9BPV8 354 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 MRPL45Q9BRJ2 306 aaKnown RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 GTPBP4Q9BZE4 634 aaKnown RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 BLZF1Q9H2G9 400 aa11.64□□□□□ -0.55
RNF220-217ENST00000496262 FBRSL1Q9HCM7 1045 aaKnown RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 MAGEC2Q9UBF1 373 aaPredicted RBP11.64□□□□□ -0.55
RNF220-217ENST00000496262 TRDMT1O14717 391 aaKnown RBP11.63□□□□□ -0.55
RNF220-217ENST00000496262 SCAMP3O14828 347 aaKnown RBP11.63□□□□□ -0.55
RNF220-217ENST00000496262 AXIN1O15169 862 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 GDF9O60383 454 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 ATG13O75143 517 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 RPP40O75818 363 aaKnown RBP11.63□□□□□ -0.55
RNF220-217ENST00000496262 ABL1P00519 1130 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 GJA4P35212 333 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 USP46P62068 366 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 AMPD3Q01432 767 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 AMPD2Q01433 879 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 ZNF268Q14587 947 aaPredicted RBP11.63□□□□□ -0.55
RNF220-217ENST00000496262 ZNF77Q15935 545 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 FAM171BQ6P995 826 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 SHC4Q6S5L8 630 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 SARM1Q6SZW1 724 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 PRR23CQ6ZRP0 262 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 TRAPPC11Q7Z392 1133 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 IQUBQ8NA54 791 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 OR6B3Q8NGW1 331 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 RPLP0P6Q8NHW5 317 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 SPATA18Q8TC71 538 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 OSCP1Q8WVF1 389 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 FUBP3Q96I24 572 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNF220-217ENST00000496262 MYRFLQ96LU7 910 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 RTKNQ9BST9 563 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 SNX25Q9H3E2 840 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 ECT2Q9H8V3 914 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 AGPAT3Q9NRZ7 376 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 CFAP45Q9UL16 551 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 CDH9Q9ULB4 789 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 MORC2Q9Y6X9 1032 aaPredicted RBP11.63□□□□□ -0.55
RNF220-217ENST00000496262 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
RNF220-217ENST00000496262 GOLGA6L19H0YKK7 550 aa11.62□□□□□ -0.55
RNF220-217ENST00000496262 EIF3DO15371 548 aaKnown RBP eCLIP11.62□□□□□ -0.55
RNF220-217ENST00000496262 POLR2DO15514 142 aaKnown RBP11.62□□□□□ -0.55
RNF220-217ENST00000496262 TGFB1I1O43294 461 aa11.62□□□□□ -0.55
RNF220-217ENST00000496262 CUTAO60888 179 aa11.62□□□□□ -0.55
RNF220-217ENST00000496262 PPP6R2O75170 966 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms