RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	USP25	Q9UHP3	1055 aa		9.36	□□□□□ -0.91
NEPRO-223	ENST00000496206	RAB23	Q9ULC3	237 aa		9.36	□□□□□ -0.91
NEPRO-223	ENST00000496206	NME7	Q9Y5B8	376 aa		9.36	□□□□□ -0.91
NEPRO-223	ENST00000496206	NCOR2	Q9Y618	2525 aa		9.36	□□□□□ -0.91
NEPRO-223	ENST00000496206	OTOL1	A6NHN0	477 aa	Predicted RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	LRRIQ3	A6PVS8	624 aa	Predicted RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206		A8MXQ7	604 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	CHURC1-FNTB	B4DL54	471 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206		F8VP50	259 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	PAPSS2	O95340	614 aa	Predicted RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	NR3C1	P04150	777 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	MYL1	P05976	194 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	FAM163B	P0C2L3	166 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	PTPN1	P18031	435 aa	Known RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	HDC	P19113	662 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	IFNAR2	P48551	515 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	FNTB	P49356	437 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	PDE6C	P51160	858 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	AP3M2	P53677	418 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	USP46	P62068	366 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	NOP14	P78316	857 aa	Known RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	GRSF1	Q12849	480 aa	Known RBP eCLIP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	USP4	Q13107	963 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	NCOA4	Q13772	614 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	ZNF77	Q15935	545 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	ZNF699	Q32M78	642 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	TMEM196	Q5HYL7	178 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	TDRD10	Q5VZ19	366 aa	Known RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	HEATR6	Q6AI08	1181 aa	Known RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	SCARA5	Q6ZMJ2	495 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	PRR23B	Q6ZRT6	265 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	SLC9A9	Q8IVB4	645 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	CPA6	Q8N4T0	437 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	ARL14EP	Q8N8R7	260 aa	Predicted RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	B3GALNT2	Q8NCR0	500 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	PARD3B	Q8TEW8	1205 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	ATP2A3	Q93084	1043 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	CHAMP1	Q96JM3	812 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	ELOVL4	Q9GZR5	314 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	KCTD10	Q9H3F6	313 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	DPEP3	Q9H4B8	488 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	SMYD3	Q9H7B4	428 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	DMAC2	Q9NW81	257 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	C2orf42	Q9NWW7	574 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	DUS2	Q9NX74	493 aa	Known RBP	9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	TRPM5	Q9NZQ8	1165 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	GCNT4	Q9P109	453 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	GMEB2	Q9UKD1	530 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	HPSE	Q9Y251	543 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	ZDHHC9	Q9Y397	364 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	WNT6	Q9Y6F9	365 aa		9.35	□□□□□ -0.91
NEPRO-223	ENST00000496206	ATP8B3	O60423	1300 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206		K7ESF4	209 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	CLDN5	O00501	218 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	PDXK	O00764	312 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	TRDMT1	O14717	391 aa	Known RBP	9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	ABL1	P00519	1130 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	RPN1	P04843	607 aa	Known RBP	9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	GJA4	P35212	333 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	SYK	P43405	635 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	RAP1GAP	P47736	663 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	NDUFA8	P51970	172 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	CACNA2D1	P54289	1103 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	CDH8	P55286	799 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	CLDN10	P78369	228 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	FOXK2	Q01167	660 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	DMWD	Q09019	674 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	IFRD2	Q12894	506 aa	Predicted RBP	9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	LPAL2	Q16609	132 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	ZNF667	Q5HYK9	610 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	CEP135	Q66GS9	1140 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	FSTL4	Q6MZW2	842 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	ERMP1	Q7Z2K6	904 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	LONP2	Q86WA8	852 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	GPR161	Q8N6U8	529 aa	Known RBP	9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	SH3RF2	Q8TEC5	729 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	TMEM174	Q8WUU8	243 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	OSCP1	Q8WVF1	389 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	CCDC47	Q96A33	483 aa	Known RBP	9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	EXOC4	Q96A65	974 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	RMDN1	Q96DB5	314 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	CHFR	Q96EP1	664 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	C8orf48	Q96LL4	319 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	SLITRK1	Q96PX8	696 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	TTLL2	Q9BWV7	592 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	B3GNT5	Q9BYG0	378 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	ZNF518B	Q9C0D4	1074 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	ECT2	Q9H8V3	914 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	VRTN	Q9H8Y1	702 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	TMEM30A	Q9NV96	361 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	ARHGAP26	Q9UNA1	814 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	ATP6V1D	Q9Y5K8	247 aa		9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	MYO18A	Q92614	2054 aa	Known RBP	9.34	□□□□□ -0.91
NEPRO-223	ENST00000496206	FAM237A	A0A1B0GTK4	181 aa		9.33	□□□□□ -0.92
NEPRO-223	ENST00000496206	ZNF840P	A6NDX5	716 aa		9.33	□□□□□ -0.92
NEPRO-223	ENST00000496206	CALU	O43852	315 aa	Predicted RBP	9.33	□□□□□ -0.92
NEPRO-223	ENST00000496206	ATG13	O75143	517 aa		9.33	□□□□□ -0.92
NEPRO-223	ENST00000496206	RNF40	O75150	1001 aa		9.33	□□□□□ -0.92
NEPRO-223	ENST00000496206	KIF20A	O95235	890 aa		9.33	□□□□□ -0.92
NEPRO-223	ENST00000496206	VNN1	O95497	513 aa		9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms