RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ZSCAN5CA6NGD5 496 aaPredicted RBP17.22■□□□□ 0.35
HLA-A-208ENST00000496081 C2CD4BA6NLJ0 364 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 XPO1O14980 1071 aaKnown RBP17.22■□□□□ 0.35
HLA-A-208ENST00000496081 GRAP2O75791 330 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 RARAP10276 462 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 FLT3P36888 993 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 CDR1P51861 262 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 TLE2Q04725 743 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 ACAP1Q15027 740 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 PPP2R5EQ16537 467 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 TRIM60Q495X7 471 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 ZDHHC17Q8IUH5 632 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 CCDC50Q8IVM0 306 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 COLGALT2Q8IYK4 626 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 SPATA18Q8TC71 538 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 RXFP2Q8WXD0 754 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 SUSD3Q96L08 255 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 GDF3Q9NR23 364 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 KANSL3Q9P2N6 904 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 PHF2O75151 1096 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 CAPN15O75808 1086 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 BEST1O76090 585 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 NPR3P17342 541 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 GPD1P21695 349 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 PCSK1P29120 753 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 ACADSBP45954 432 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 CCL23P55773 120 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 PLCB3Q01970 1234 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 GUCY2DQ02846 1103 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 SLC25A11Q02978 314 aaKnown RBP17.21■□□□□ 0.35
HLA-A-208ENST00000496081 FAM43BQ6ZT52 329 aaPredicted RBP17.21■□□□□ 0.35
HLA-A-208ENST00000496081 CLEC20AQ6ZU45 233 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 ANKS1BQ7Z6G8 1248 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 PIGZQ86VD9 579 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 CCDC26Q8TAB7 109 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 DIS3LQ8TF46 1054 aaKnown RBP17.21■□□□□ 0.35
HLA-A-208ENST00000496081 RNF25Q96BH1 459 aaPredicted RBP17.21■□□□□ 0.35
HLA-A-208ENST00000496081 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 TOX2Q96NM4 488 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 CNPY3Q9BT09 278 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 MED10Q9BTT4 135 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 EPB41L5Q9HCM4 733 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 KLHL11Q9NVR0 708 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 DSEQ9UL01 958 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 MTUS1Q9ULD2 1270 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 PCDHB7Q9Y5E2 793 aa17.21■□□□□ 0.35
HLA-A-208ENST00000496081 RALAP11233 206 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 LCP1P13796 627 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 PDGFRAP16234 1089 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 IL1R2P27930 398 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 RNASELQ05823 741 aaKnown RBP17.2■□□□□ 0.34
HLA-A-208ENST00000496081 CYP1B1Q16678 543 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 C1orf53Q5VUE5 145 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 MAATS1Q7Z4T9 603 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 POLNQ7Z5Q5 900 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 METTL23Q86XA0 190 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 IFT20Q8IY31 132 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 GSPT2Q8IYD1 628 aaKnown RBP17.2■□□□□ 0.34
HLA-A-208ENST00000496081 RCOR2Q8IZ40 523 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 CLEC4CQ8WTT0 213 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 ARMC5Q96C12 935 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 ACBD6Q9BR61 282 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 PPP1R12CQ9BZL4 782 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 ASNSD1Q9NWL6 643 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 DNAJB4Q9UDY4 337 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 ESYT3A0FGR9 886 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 PI4K2BG5E9Z4 385 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 TTI1O43156 1089 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 RNF8O76064 485 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 CXCL10P02778 98 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 KRT1P04264 644 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 CHRNA3P32297 505 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 CYP2C18P33260 490 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 SLC8A3P57103 927 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 HADHQ16836 314 aaKnown RBP17.2■□□□□ 0.34
HLA-A-208ENST00000496081 CCDC14Q49A88 953 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 SH3PXD2AQ5TCZ1 1133 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 FAM35AQ86V20 835 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 CRIPAKQ8N1N5 446 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 MAGOHBQ96A72 148 aaKnown RBP17.2■□□□□ 0.34
HLA-A-208ENST00000496081 ACSF2Q96CM8 615 aaPredicted RBP17.2■□□□□ 0.34
HLA-A-208ENST00000496081 RBM41Q96IZ5 413 aaKnown RBP17.2■□□□□ 0.34
HLA-A-208ENST00000496081 SLITRK1Q96PX8 696 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 HEMGNQ9BXL5 484 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 OSBPL8Q9BZF1 889 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.2■□□□□ 0.34
HLA-A-208ENST00000496081 DDX56Q9NY93 547 aaKnown RBP17.2■□□□□ 0.34
HLA-A-208ENST00000496081 TTC3P53804 2025 aa17.2■□□□□ 0.34
HLA-A-208ENST00000496081 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.19■□□□□ 0.34
HLA-A-208ENST00000496081 BHMG1C9JSJ3 638 aaPredicted RBP17.19■□□□□ 0.34
HLA-A-208ENST00000496081 TMEM189-UBE2V1I3L0A0 370 aa17.19■□□□□ 0.34
HLA-A-208ENST00000496081 DPYSL4O14531 572 aa17.19■□□□□ 0.34
HLA-A-208ENST00000496081 FAM200BP0CF97 657 aa17.19■□□□□ 0.34
HLA-A-208ENST00000496081 TYMPP19971 482 aa17.19■□□□□ 0.34
HLA-A-208ENST00000496081 MIPP30301 263 aa17.19■□□□□ 0.34
HLA-A-208ENST00000496081 SCNN1AP37088 669 aa17.19■□□□□ 0.34
HLA-A-208ENST00000496081 OR1G1P47890 313 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms