RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 NUDT17P0C025 328 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 C6orf222P0C671 652 aaPredicted RBP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 TFE3P19532 575 aaPredicted RBP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 LMO2P25791 158 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 HOXA11P31270 313 aaPredicted RBP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 MAN1A1P33908 653 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 GPD2P43304 727 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 MAGEA4P43358 317 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 BBS9Q3SYG4 887 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 FBXW10Q5XX13 1052 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 OTUD6BQ8N6M0 293 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 PEBP4Q96S96 227 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 PCDHGC3Q9UN70 934 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 TIMM13Q9Y5L4 95 aaPredicted RBP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 MRPL42Q9Y6G3 142 aaKnown RBP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 EXOC1LA0A1B0GW35 172 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 KDELR1P24390 212 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 GBP1P32455 592 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 ANKRD22Q5VYY1 191 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 DARS2Q6PI48 645 aaKnown RBP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 CEP57Q86XR8 500 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 UNC45BQ8IWX7 931 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 SPATA18Q8TC71 538 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 FAM149B1Q96BN6 582 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 XPO6Q96QU8 1125 aaKnown RBP11.7□□□□□ -0.54
TBRG4-217ENST00000495973 ZNF518BQ9C0D4 1074 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 MAF1Q9H063 256 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 ASB7Q9H672 318 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 KIF9Q9HAQ2 790 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 HESX1Q9UBX0 185 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 GJD2Q9UKL4 321 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 PPME1Q9Y570 386 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 SCN1AP35498 2009 aa11.7□□□□□ -0.54
TBRG4-217ENST00000495973 TCRBV5S1A1TA0A578 114 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 TMEM120BA0PK00 339 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 IGF2BP3O00425 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 PRPSAP2O60256 369 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 EIF3EP60228 445 aaKnown RBP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 GRB14Q14449 540 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 MFSD10Q14728 455 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 PAN2Q504Q3 1202 aaKnown RBP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 TRNP1Q6NT89 227 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 EXOC3L1Q86VI1 746 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 CABS1Q96KC9 395 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 ELAC2Q9BQ52 826 aaKnown RBP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 MEIS3P2A8K0S8 358 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 VDRP11473 427 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 VCPP55072 806 aaKnown RBP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 SLC25A11Q02978 314 aaKnown RBP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 TADA2BQ86TJ2 420 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 C4orf33Q8N1A6 199 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 TLCD1Q96CP7 247 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 KLF6Q99612 283 aaPredicted RBP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 A0A0G2JMZ2 1700 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 LOC285556D6RIA3 1793 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 CLDN5O00501 218 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 RBP3P10745 1247 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 BRAFP15056 766 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 KRT15P19012 456 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 EFTUD2Q15029 972 aaKnown RBP eCLIP11.69□□□□□ -0.545e-7■■■■□ 25.4
TBRG4-217ENST00000495973 SLC27A1Q6PCB7 646 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 TRMT10CQ7L0Y3 403 aaKnown RBP11.69□□□□□ -0.54
TBRG4-217ENST00000495973 TTC30AQ86WT1 665 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 LRRC34Q8IZ02 419 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 HOMER3Q9NSC5 361 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 NME7Q9Y5B8 376 aa11.69□□□□□ -0.54
TBRG4-217ENST00000495973 GOLGA6L7A0A1B0GV03 622 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 TCRBV7S3A2A0A539 114 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 GOLGA8RI6L899 631 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 CLGNO14967 610 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 FAM107AO95990 144 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 PGK1P00558 417 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 KRT7P08729 469 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 PAEPP09466 180 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 GPD1P21695 349 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 NOTUMQ6P988 496 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 RHBDF2Q6PJF5 856 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 ANKRD23Q86SG2 305 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 CXorf38Q8TB03 319 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 FAM172AQ8WUF8 416 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 DDX20Q9UHI6 824 aaKnown RBP11.68□□□□□ -0.54
TBRG4-217ENST00000495973 ITGA11Q9UKX5 1188 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 TPX2Q9ULW0 747 aaKnown RBP11.68□□□□□ -0.54
TBRG4-217ENST00000495973 TRAPPC3O43617 180 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 KLRC2P26717 231 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 SSTR1P30872 391 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 CNGA2Q16280 664 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 CA9Q16790 459 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 FAM110CQ1W6H9 321 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 ALLCQ8N6M5 410 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 BEST2Q8NFU1 509 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 AP5M1Q9H0R1 490 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
TBRG4-217ENST00000495973 DDX56Q9NY93 547 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms