RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 TBX2Q13207 712 aaPredicted RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 MTMR3Q13615 1198 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 ARID5BQ14865 1188 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 STILQ15468 1287 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 SKIV2LQ15477 1246 aaKnown RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 CLUL1Q15846 466 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 GOLGA7BQ2TAP0 167 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 PRSS36Q5K4E3 855 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 GPRIN1Q7Z2K8 1008 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 IRF2BP2Q7Z5L9 587 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 TMEM150AQ86TG1 271 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 STKLD1Q8NE28 680 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 SMG7Q92540 1137 aaKnown RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 TRMT2BQ96GJ1 504 aaKnown RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 MRFAP1L1Q96HT8 127 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 APOL5Q9BWW9 433 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 WDR6Q9NNW5 1121 aaKnown RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 DMAP1Q9NPF5 467 aaPredicted RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 HCFC1R1Q9NWW0 138 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 THEGQ9P2T0 379 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 DNMT3BQ9UBC3 853 aaKnown RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
KDM1A-205ENST00000494920 USP15Q9Y4E8 981 aaPredicted RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 NUP210Q8TEM1 1887 aaPredicted RBP11.68□□□□□ -0.54
KDM1A-205ENST00000494920 SLC38A8A6NNN8 435 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 GFPT2O94808 682 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 LRG1P02750 347 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 CHRNB2P17787 502 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 TRIM21P19474 475 aaKnown RBP11.67□□□□□ -0.54
KDM1A-205ENST00000494920 CDH5P33151 784 aaPredicted RBP11.67□□□□□ -0.54
KDM1A-205ENST00000494920 STAT1P42224 750 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 GPD2P43304 727 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 ALDH1A3P47895 512 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 BCAT1P54687 386 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 NTHL1P78549 312 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 PDE4CQ08493 712 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 SMAD2Q15796 467 aaKnown RBP11.67□□□□□ -0.54
KDM1A-205ENST00000494920 SLC5A9Q2M3M2 681 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 RAB41Q5JT25 222 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 SPECC1LQ69YQ0 1117 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 GAREM2Q75VX8 874 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 DNAJB7Q7Z6W7 309 aaPredicted RBP11.67□□□□□ -0.54
KDM1A-205ENST00000494920 NOP9Q86U38 636 aaKnown RBP11.67□□□□□ -0.54
KDM1A-205ENST00000494920 WDTC1Q8N5D0 677 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 GPR152Q8TDT2 470 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 SLC35F5Q8WV83 523 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 IQCDQ96DY2 449 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 MED10Q9BTT4 135 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 NUP58Q9BVL2 599 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 UBXN6Q9BZV1 441 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 DNAI2Q9GZS0 605 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 POMKQ9H5K3 350 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 AIPL1Q9NZN9 384 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 CYTH4Q9UIA0 394 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 CAPN11Q9UMQ6 739 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 USP3Q9Y6I4 520 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 KIF26AQ9ULI4 1882 aaPredicted RBP11.67□□□□□ -0.54
KDM1A-205ENST00000494920 MYO10Q9HD67 2058 aa11.67□□□□□ -0.54
KDM1A-205ENST00000494920 TCF20Q9UGU0 1960 aaKnown RBP11.67□□□□□ -0.54
KDM1A-205ENST00000494920 HELZP42694 1942 aaKnown RBP11.66□□□□□ -0.54
KDM1A-205ENST00000494920 NCANO14594 1321 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 CLUHO75153 1309 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 LRRC53A6NM62 1247 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 XPO1O14980 1071 aaKnown RBP11.66□□□□□ -0.54
KDM1A-205ENST00000494920 XYLBO75191 536 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 TPM3P06753 285 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 RHOP08100 348 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 SETSIPP0DME0 302 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 HNRNPH3P31942 346 aaKnown RBP11.66□□□□□ -0.54
KDM1A-205ENST00000494920 GRIK1P39086 918 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 PRKCIP41743 596 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 MTHFRP42898 656 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 PLA2G4AP47712 749 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 KIF11P52732 1056 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 SLC5A3P53794 718 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 EPHB3P54753 998 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 MAP3K7CLP57077 242 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 BPIFB4P59827 614 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 FMO1Q01740 532 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 PTK2Q05397 1052 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 BST2Q10589 180 aaKnown RBP11.66□□□□□ -0.54
KDM1A-205ENST00000494920 CBX2Q14781 532 aaPredicted RBP11.66□□□□□ -0.54
KDM1A-205ENST00000494920 DENND1BQ6P3S1 775 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 DENND5BQ6ZUT9 1274 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 BHLHA9Q7RTU4 235 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 GRASPQ7Z6J2 395 aaPredicted RBP11.66□□□□□ -0.54
KDM1A-205ENST00000494920 ITIH5Q86UX2 942 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 PIGZQ86VD9 579 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 SCN4BQ8IWT1 228 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 SHKBP1Q8TBC3 707 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 GIPC2Q8TF65 315 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 SLC20A1Q8WUM9 679 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 TCEAL4Q96EI5 215 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 PCMTD1Q96MG8 357 aaPredicted RBP11.66□□□□□ -0.54
KDM1A-205ENST00000494920 NECTIN4Q96NY8 510 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 TRIM5Q9C035 493 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
KDM1A-205ENST00000494920 M0QYV0 167 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms