RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ZNF667Q5HYK9 610 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 DGKKQ5KSL6 1271 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 CC2D1AQ6P1N0 951 aaPredicted RBP10.23□□□□□ -0.77
MSH5-218ENST00000494646 VSTM1Q6UX27 236 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 KRBA2Q6ZNG9 492 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 Q6ZS52 159 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 DENND5BQ6ZUT9 1274 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 SLC9A9Q8IVB4 645 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 ZBTB44Q8NCP5 570 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 CCDC47Q96A33 483 aaKnown RBP10.23□□□□□ -0.77
MSH5-218ENST00000494646 SYAP1Q96A49 352 aaPredicted RBP10.23□□□□□ -0.77
MSH5-218ENST00000494646 SPATA17Q96L03 361 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 MED10Q9BTT4 135 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 ZNF518BQ9C0D4 1074 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 RNF38Q9H0F5 515 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 XYLT2Q9H1B5 865 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 LINC00597Q9H2U6 94 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 GOLPH3LQ9H4A5 285 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 SMYD3Q9H7B4 428 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 FBRSL1Q9HCM7 1045 aaKnown RBP10.23□□□□□ -0.77
MSH5-218ENST00000494646 TRPM5Q9NZQ8 1165 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 CHORDC1Q9UHD1 332 aaPredicted RBP10.23□□□□□ -0.77
MSH5-218ENST00000494646 PCDHGA2Q9Y5H1 932 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 GVINP1Q7Z2Y8 2422 aa10.23□□□□□ -0.77
MSH5-218ENST00000494646 TRAV19A0A0A6YYK7 116 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 FAM237AA0A1B0GTK4 181 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 SOBPA7XYQ1 873 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 CHURC1-FNTBB4DL54 471 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 STAU1O95793 577 aaKnown RBP10.22□□□□□ -0.77
MSH5-218ENST00000494646 FAM163BP0C2L3 166 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 GJA4P35212 333 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 FNTBP49356 437 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 CCR3P51677 355 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 ZXDBP98169 803 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 FAM160A1Q05DH4 1040 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 C1QBPQ07021 282 aaKnown RBP10.22□□□□□ -0.77
MSH5-218ENST00000494646 TAF10Q12962 218 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 ORC1Q13415 861 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 MTF1Q14872 753 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 SGSM1Q2NKQ1 1148 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 ZNF699Q32M78 642 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 NAIF1Q69YI7 327 aaPredicted RBP10.22□□□□□ -0.77
MSH5-218ENST00000494646 HEATR6Q6AI08 1181 aaKnown RBP10.22□□□□□ -0.77
MSH5-218ENST00000494646 SPOPLQ6IQ16 392 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 C1orf228Q6PIY5 440 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 ACOT1Q86TX2 421 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 SPEM1Q8N4L4 309 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 SH3RF2Q8TEC5 729 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 RUBCNQ92622 972 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 NELL1Q92832 810 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 CHFRQ96EP1 664 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 MSANTD3Q96H12 275 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 KCNK16Q96T55 309 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 SCAND2PQ9GZW5 306 aaPredicted RBP10.22□□□□□ -0.77
MSH5-218ENST00000494646 SDCBP2Q9H190 292 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 MMRN2Q9H8L6 949 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 ECT2Q9H8V3 914 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 PRMT8Q9NR22 394 aaPredicted RBP10.22□□□□□ -0.77
MSH5-218ENST00000494646 TMEM30AQ9NV96 361 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 POLR3BQ9NW08 1133 aaPredicted RBP10.22□□□□□ -0.77
MSH5-218ENST00000494646 DUS2Q9NX74 493 aaKnown RBP10.22□□□□□ -0.77
MSH5-218ENST00000494646 GCNT4Q9P109 453 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 FRMD4BQ9Y2L6 1034 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 ATP6V1DQ9Y5K8 247 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 WNT6Q9Y6F9 365 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 OTOGLQ3ZCN5 2332 aa10.22□□□□□ -0.77
MSH5-218ENST00000494646 A0A1W2PQ27 194 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 A0A1W2PQ64 194 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 A0A1W2PQD8 194 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 SCAMP3O14828 347 aaKnown RBP10.21□□□□□ -0.77
MSH5-218ENST00000494646 TRIM66O15016 1216 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 LILRB5O75023 590 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 RHOBTB3O94955 611 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 EGFP01133 1207 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 MYL1P05976 194 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 TDGF1P13385 188 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 NR2F2P24468 414 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 ID4P47928 161 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 IFNAR2P48551 515 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 AP3M2P53677 418 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 NRLP54845 237 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 CLDN10P78369 228 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 SRSF5Q13243 272 aaKnown RBP10.21□□□□□ -0.77
MSH5-218ENST00000494646 ADAM9Q13443 819 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 CCINQ13939 588 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 ZNF268Q14587 947 aaPredicted RBP10.21□□□□□ -0.77
MSH5-218ENST00000494646 KCNB1Q14721 858 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 PPP2R5DQ14738 602 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 ZNF77Q15935 545 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 C1orf220Q5T0J3 134 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 PKN3Q6P5Z2 889 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 MAMSTRQ6ZN01 415 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 PAQR9Q6ZVX9 377 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 SMYD4Q8IYR2 804 aaPredicted RBP10.21□□□□□ -0.77
MSH5-218ENST00000494646 NUP93Q8N1F7 819 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 OSCP1Q8WVF1 389 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 EEF2KMTQ96G04 330 aa10.21□□□□□ -0.77
MSH5-218ENST00000494646 C8orf48Q96LL4 319 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms