RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 DLATP10515 647 aaKnown RBP13.51□□□□□ -0.25
SKA1-205ENST00000494518 ANXA13P27216 316 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 MPLP40238 635 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 MAGEA11P43364 429 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 CYP2J2P51589 502 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 ASIC1P78348 528 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 ZXDBP98169 803 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 PLK5Q496M5 336 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 FOXD4L5Q5VV16 416 aaPredicted RBP13.51□□□□□ -0.25
SKA1-205ENST00000494518 TTC30AQ86WT1 665 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 NELFCDQ8IXH7 590 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 FSIP1Q8NA03 581 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 FOXD4L4Q8WXT5 416 aaPredicted RBP13.51□□□□□ -0.25
SKA1-205ENST00000494518 DHX58Q96C10 678 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 FUBP3Q96I24 572 aaKnown RBP eCLIP13.51□□□□□ -0.25
SKA1-205ENST00000494518 TPSD1Q9BZJ3 242 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 SMPD4Q9NXE4 827 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 CDH9Q9ULB4 789 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 FRYQ5TBA9 3013 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 ASCC3Q8N3C0 2202 aaKnown RBP13.51□□□□□ -0.25
SKA1-205ENST00000494518 CEP192Q8TEP8 1941 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 CCDC163A0A0D9SF12 145 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 SOBPA7XYQ1 873 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 F8VP50 259 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 CLSTN1O94985 981 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 APBB3O95704 486 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 ZNF806P0C7X5 589 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 WARSP23381 471 aaKnown RBP13.5□□□□□ -0.25
SKA1-205ENST00000494518 CASP1P29466 404 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 GBP1P32455 592 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 DGKEP52429 567 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 CACNA2D1P54289 1103 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 CREB5Q02930 508 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 DUOXA2Q1HG44 320 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 C2orf27AQ580R0 203 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 STPG1Q5TH74 334 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 DENND5BQ6ZUT9 1274 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 HS2ST1Q7LGA3 356 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 TRAPPC11Q7Z392 1133 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 SFTPA1Q8IWL2 248 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 CAMKK1Q8N5S9 505 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 SPATA18Q8TC71 538 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 CCDC127Q96BQ5 260 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 PCED1BQ96HM7 432 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 LOXL4Q96JB6 756 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 DUSP15Q9H1R2 295 aaPredicted RBP13.5□□□□□ -0.25
SKA1-205ENST00000494518 DPEP3Q9H4B8 488 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 TRPM5Q9NZQ8 1165 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 TFIP11Q9UBB9 837 aaKnown RBP13.5□□□□□ -0.25
SKA1-205ENST00000494518 ARHGAP26Q9UNA1 814 aa13.5□□□□□ -0.25
SKA1-205ENST00000494518 CHD6Q8TD26 2715 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 IGF2RP11717 2491 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 LEFTY2O00292 366 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 CLDN5O00501 218 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 NFATC1O95644 943 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 CST3P01034 146 aaPredicted RBP13.49□□□□□ -0.25
SKA1-205ENST00000494518 TNNI1P19237 187 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 OPRD1P41143 372 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 NR1H3Q13133 447 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 E2F4Q16254 413 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 FOXD4L6Q3SYB3 417 aaPredicted RBP13.49□□□□□ -0.25
SKA1-205ENST00000494518 FBXO43Q4G163 708 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 PLA2G2CQ5R387 149 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 N4BP2L1Q5TBK1 243 aaPredicted RBP13.49□□□□□ -0.25
SKA1-205ENST00000494518 VSTM1Q6UX27 236 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 FOXD4L3Q6VB84 417 aaPredicted RBP13.49□□□□□ -0.25
SKA1-205ENST00000494518 STXBP4Q6ZWJ1 553 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 SYT13Q7L8C5 426 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 LIMS2Q7Z4I7 341 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 FILIP1Q7Z7B0 1213 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 WDR49Q8IV35 697 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 CCDC33Q8N5R6 958 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 TSTD1Q8NFU3 115 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 OR6B3Q8NGW1 331 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 MYCBPAPQ8TBZ2 947 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 EXOC4Q96A65 974 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 ACDQ96AP0 544 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 ELMO3Q96BJ8 720 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 SPATA17Q96L03 361 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 TRIM9Q9C026 710 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 TNMDQ9H2S6 317 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 ZDHHC4Q9NPG8 344 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 TMEM30AQ9NV96 361 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 CPQQ9Y646 472 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 CFAP47Q6ZTR5 3102 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 ADAMTS9Q9P2N4 1935 aa13.49□□□□□ -0.25
SKA1-205ENST00000494518 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
SKA1-205ENST00000494518 SPTLC2O15270 562 aa13.48□□□□□ -0.25
SKA1-205ENST00000494518 TGFB1I1O43294 461 aa13.48□□□□□ -0.25
SKA1-205ENST00000494518 STX6O43752 255 aa13.48□□□□□ -0.25
SKA1-205ENST00000494518 FOXD2O60548 495 aaPredicted RBP13.48□□□□□ -0.25
SKA1-205ENST00000494518 AKAP3O75969 853 aa13.48□□□□□ -0.25
SKA1-205ENST00000494518 CYP17A1P05093 508 aa13.48□□□□□ -0.25
SKA1-205ENST00000494518 GNL1P36915 607 aaPredicted RBP13.48□□□□□ -0.25
SKA1-205ENST00000494518 SLC6A11P48066 632 aa13.48□□□□□ -0.25
SKA1-205ENST00000494518 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
SKA1-205ENST00000494518 MESP2Q0VG99 397 aa13.48□□□□□ -0.25
SKA1-205ENST00000494518 GSE1Q14687 1217 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms