RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 E2F7Q96AV8 911 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 MLST8Q9BVC4 326 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 TRIM8Q9BZR9 551 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 LRRCC1Q9C099 1032 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ADD3Q9UEY8 706 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 STXBP5LQ9Y2K9 1186 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 NR2E3Q9Y5X4 410 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 KIF28PB7ZC32 967 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 WDHD1O75717 1129 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 FKBP9O95302 570 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCDC172P0C7W6 258 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCDC192P0DO97 292 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 VSIG10L2P0DP72 767 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 MYCLP1P12525 358 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ALAS1P13196 640 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCNB1P14635 433 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 GJB2P29033 226 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 TBX4P57082 545 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CBX1P83916 185 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 DDB1Q16531 1140 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 RNF187Q5TA31 235 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 FKBP9P1Q75LS8 142 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ITPRIPQ8IWB1 547 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 DRC7Q8IY82 874 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ENDOVQ8N8Q3 282 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 LRRC15Q8TF66 581 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 GAB3Q8WWW8 586 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 RPGRQ92834 1020 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZKSCAN4Q969J2 545 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CFAP53Q96M91 514 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZNF317Q96PQ6 595 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 TCF25Q9BQ70 676 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ORAI3Q9BRQ5 295 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 MENTQ9BUN1 341 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 NDST4Q9H3R1 872 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 FBXO2Q9UK22 296 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 MYPNQ86TC9 1320 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 MTCL1Q9Y4B5 1905 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 TRAFD1O14545 582 aaPredicted RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 AP1G1O43747 822 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 DNAJC6O75061 913 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 ALDH1A2O94788 518 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 IGKV5-2P06315 115 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 TUBBP07437 444 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZFP36P26651 326 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 INHBCP55103 352 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 MANFP55145 182 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 PPARAQ07869 468 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 PITRM1Q5JRX3 1037 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 FKBP15Q5T1M5 1219 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 PCSK4Q6UW60 755 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 SRGAP1Q7Z6B7 1085 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 PIGWQ7Z7B1 504 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 SLFN11Q7Z7L1 901 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZNF589Q86UQ0 364 aaPredicted RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CXorf67Q86X51 503 aaPredicted RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 TMPRSS6Q8IU80 811 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 VRK3Q8IV63 474 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 TGFBRAP1Q8WUH2 860 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 JDP2Q8WYK2 163 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 NELFAQ9H3P2 528 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 ATP6V0A4Q9HBG4 840 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 TOPORSQ9NS56 1045 aaPredicted RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 STK32BQ9NY57 414 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 ANAPC4Q9UJX5 808 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CEP83Q9Y592 693 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CNTNAP2Q9UHC6 1331 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 A0A0D9SFI3 127 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 EIF3CLB5ME19 914 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 OVOL3O00110 214 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 NEMP1O14524 444 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 EIF3HO15372 352 aaKnown RBP eCLIP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 TMEM127O75204 238 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CSDE1O75534 798 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 IL1BP01584 269 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 MASP1P48740 699 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 USP14P54578 494 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 BCAR1P56945 870 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCT2P78371 535 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 FAM189BP81408 668 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 SATB1Q01826 763 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 ACTN3Q08043 901 aaPredicted RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 MGAT5Q09328 741 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 ITGB3BPQ13352 177 aaPredicted RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CSRP2Q16527 193 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 TBC1D25Q3MII6 688 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCDC186Q7Z3E2 898 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 APLFQ8IW19 511 aaPredicted RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 TMTC2Q8N394 836 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 RASGEF1CQ8N431 466 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 LSM14AQ8ND56 463 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCT6BQ92526 530 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 MIEF2Q96C03 454 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCDC51Q96ER9 411 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 MFSD3Q96ES6 412 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 EIF3CQ99613 913 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 LSM14BQ9BX40 385 aaKnown RBP2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 PARD6BQ9BYG5 372 aa2.82□□□□□ -1.96
CDC42EP3-205ENST00000494083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms