RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ABHD14A-ACY1A0A1B0GW23 586 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 A0A1W2PPC1 479 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 DENND3A2RUS2 1198 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 A6NJY4 79 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 SFI1A8K8P3 1242 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-222ENST00000493919 MCF2LO15068 1137 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 ATP6V1G2O95670 118 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 CPA3P15088 417 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 PFKFB1P16118 471 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 TKTP29401 623 aaKnown RBP12.16□□□□□ -0.46
BRCA1-222ENST00000493919 NR2C2P49116 596 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 PEX3P56589 373 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 RAB15P59190 212 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 RELQ04864 619 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-222ENST00000493919 LRMPQ12912 555 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 DMP1Q13316 513 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-222ENST00000493919 ADRM1Q16186 407 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 ODR4Q5SWX8 454 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 FAM109BQ6ICB4 259 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-222ENST00000493919 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
BRCA1-222ENST00000493919 SV2BQ7L1I2 683 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 DYMQ7RTS9 669 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-222ENST00000493919 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 DAW1Q8N136 415 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 SPATA18Q8TC71 538 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 STAMQ92783 540 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 MINDY3Q9H8M7 445 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 NOD2Q9HC29 1040 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 RAB21Q9UL25 225 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 PIN4Q9Y237 131 aaKnown RBP12.16□□□□□ -0.46
BRCA1-222ENST00000493919 GIT1Q9Y2X7 761 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 TSC22D4Q9Y3Q8 395 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
BRCA1-222ENST00000493919 GRXCR1A8MXD5 290 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 EFCAB14O75071 495 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 ZC3H11AO75152 810 aaKnown RBP eCLIP12.15□□□□□ -0.46
BRCA1-222ENST00000493919 FAM13AO94988 1023 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 UPP2O95045 317 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 PCNAP12004 261 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 GLULP15104 373 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
BRCA1-222ENST00000493919 NAMPTP43490 491 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 MAPK7Q13164 816 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 GNA13Q14344 377 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 PPP4R4Q6NUP7 873 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 CAPN12Q6ZSI9 719 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 FSIP1Q8NA03 581 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 LINC01599Q8WXQ3 324 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 SERINC2Q96SA4 455 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 FUCA2Q9BTY2 467 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 TIPINQ9BVW5 301 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 FTHL17Q9BXU8 183 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 NUF2Q9BZD4 464 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 TRIM5Q9C035 493 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 KLHL4Q9C0H6 718 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 KCND2Q9NZV8 630 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 PDP2Q9P2J9 529 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 CTNNAL1Q9UBT7 734 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 RASAL2Q9UJF2 1139 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 KCNH3Q9ULD8 1083 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 L1RE1Q9UN81 338 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 ADGRA3Q8IWK6 1321 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 SULT1B1O43704 296 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 TCEA3O75764 348 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 AMHP03971 560 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 SERPINB6P35237 376 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 PTENP60484 403 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 CETN1Q12798 172 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 SEMA3AQ14563 771 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 PCSK7Q16549 785 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 ZC3H12BQ5HYM0 836 aaKnown RBP12.15□□□□□ -0.46
BRCA1-222ENST00000493919 RASIP1Q5U651 963 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 LRRC8AQ8IWT6 810 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 RHOT2Q8IXI1 618 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 SIX5Q8N196 739 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 LSMEM1Q8N8F7 131 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.46
BRCA1-222ENST00000493919 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 SLC9A7Q96T83 725 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 ADAM2Q99965 735 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 SIKE1Q9BRV8 207 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 CCDC28BQ9BUN5 200 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 PCDH12Q9NPG4 1184 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 DDX56Q9NY93 547 aaKnown RBP12.15□□□□□ -0.46
BRCA1-222ENST00000493919 PCDHB4Q9Y5E5 795 aa12.15□□□□□ -0.46
BRCA1-222ENST00000493919 CHD9Q3L8U1 2897 aa12.15□□□□□ -0.47
BRCA1-222ENST00000493919 CHD7Q9P2D1 2997 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 GBF1Q92538 1859 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-222ENST00000493919 PRPF6O94906 941 aaKnown RBP12.14□□□□□ -0.47
BRCA1-222ENST00000493919 NCAM1P13591 858 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 KRT13P13646 458 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 CTRB1P17538 263 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 DDX5P17844 614 aaKnown RBP12.14□□□□□ -0.47
BRCA1-222ENST00000493919 CMA1P23946 247 aa12.14□□□□□ -0.47
BRCA1-222ENST00000493919 MBTD1Q05BQ5 628 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms