RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 EXOC4Q96A65 974 aa25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 C8orf48Q96LL4 319 aa25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 TTLL2Q9BWV7 592 aa25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 VRTNQ9H8Y1 702 aa25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 DUS2Q9NX74 493 aaKnown RBP25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 TRPM5Q9NZQ8 1165 aa25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 GCNT4Q9P109 453 aa25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 HPSEQ9Y251 543 aa25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 ANAPC1Q9H1A4 1944 aa25.24■■□□□ 1.63
RHBDD3-206ENST00000493894 DMXL1Q9Y485 3027 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 CHURC1-FNTBB4DL54 471 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 TRDMT1O14717 391 aaKnown RBP25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 PFKLP17858 780 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 HDCP19113 662 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 FNTBP49356 437 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 USP46P62068 366 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 NOP14P78316 857 aaKnown RBP25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 FSTL4Q6MZW2 842 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 PRR23BQ6ZRT6 265 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 LONP2Q86WA8 852 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 SLC9A9Q8IVB4 645 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 B3GALNT2Q8NCR0 500 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 SH3RF2Q8TEC5 729 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 TMEM174Q8WUU8 243 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 CHFRQ96EP1 664 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 KCTD10Q9H3F6 313 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 ARHGAP26Q9UNA1 814 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 HELZP42694 1942 aaKnown RBP25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 DCHS1Q96JQ0 3298 aa25.23■■□□□ 1.63
RHBDD3-206ENST00000493894 PDXKO00764 312 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 NR3C1P04150 777 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 TCF3P15923 654 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 CNR2P34972 360 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 PPP3CCP48454 512 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 CLDN10P78369 228 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 DMWDQ09019 674 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 NCOA4Q13772 614 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 ZNF667Q5HYK9 610 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 LAIR1Q6GTX8 287 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 ZNF518BQ9C0D4 1074 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 SMYD3Q9H7B4 428 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 ECT2Q9H8V3 914 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 DMAC2Q9NW81 257 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 C2orf42Q9NWW7 574 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 WNT6Q9Y6F9 365 aa25.22■■□□□ 1.63
RHBDD3-206ENST00000493894 ATP8B3O60423 1300 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 KIF20AO95235 890 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 RPN1P04843 607 aaKnown RBP25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 GJA4P35212 333 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 SYKP43405 635 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 LPAL2Q16609 132 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 HEATR6Q6AI08 1181 aaKnown RBP25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 SCARA5Q6ZMJ2 495 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 CCDC47Q96A33 483 aaKnown RBP25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 CHAMP1Q96JM3 812 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 ZDHHC9Q9Y397 364 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 ATP6V1DQ9Y5K8 247 aa25.21■■□□□ 1.63
RHBDD3-206ENST00000493894 ATG13O75143 517 aa25.2■■□□□ 1.62
RHBDD3-206ENST00000493894 DRD1P21728 446 aa25.2■■□□□ 1.62
RHBDD3-206ENST00000493894 HOXA6P31267 233 aa25.2■■□□□ 1.62
RHBDD3-206ENST00000493894 CACNA2D1P54289 1103 aa25.2■■□□□ 1.62
RHBDD3-206ENST00000493894 SIM2Q14190 667 aaPredicted RBP25.2■■□□□ 1.62
RHBDD3-206ENST00000493894 EML3Q32P44 896 aa25.2■■□□□ 1.62
RHBDD3-206ENST00000493894 SLITRK1Q96PX8 696 aa25.2■■□□□ 1.62
RHBDD3-206ENST00000493894 P2RY13Q9BPV8 354 aa25.2■■□□□ 1.62
RHBDD3-206ENST00000493894 CALUO43852 315 aaPredicted RBP25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 EGFP01133 1207 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 C4BPAP04003 597 aaKnown RBP25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 P4HA1P13674 534 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 RAP1GAPP47736 663 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 NDUFA8P51970 172 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 CEP135Q66GS9 1140 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 PKN3Q6P5Z2 889 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 TNIP3Q96KP6 325 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 B3GNT5Q9BYG0 378 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 TMEM30AQ9NV96 361 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 USP18Q9UMW8 372 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 FRMD4BQ9Y2L6 1034 aa25.19■■□□□ 1.62
RHBDD3-206ENST00000493894 FAM237AA0A1B0GTK4 181 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 ZNF840PA6NDX5 716 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 CLDN5O00501 218 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 RNF40O75150 1001 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 VNN1O95497 513 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 NFATC1O95644 943 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 CDH8P55286 799 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 DLG4P78352 724 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 IFRD2Q12894 506 aaPredicted RBP25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 NR1H3Q13133 447 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 PUM1Q14671 1186 aaKnown RBP eCLIP25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 ZACNQ401N2 412 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 FBXO43Q4G163 708 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 FAM35AQ86V20 835 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 WDR5BQ86VZ2 330 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 TMC2Q8TDI7 906 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 CD101Q93033 1021 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 MED10Q9BTT4 135 aa25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 SCAND2PQ9GZW5 306 aaPredicted RBP25.18■■□□□ 1.62
RHBDD3-206ENST00000493894 HRO43593 1189 aa25.17■■□□□ 1.62
RHBDD3-206ENST00000493894 ABL1P00519 1130 aa25.17■■□□□ 1.62
RHBDD3-206ENST00000493894 PRR29P0C7W0 189 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms