RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 UPK3BL1B0FP48 263 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 UPK3BL2E5RIL1 263 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 H3BQV1 296 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 LEFTY2O00292 366 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 SLC9A3R1O14745 358 aaPredicted RBP18.91■□□□□ 0.62
NUP50-218ENST00000493456 LDHAP00338 332 aaKnown RBP18.91■□□□□ 0.62
NUP50-218ENST00000493456 CYP17A1P05093 508 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 HOXD12P35452 270 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 WNT7BP56706 349 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 CCDC142Q17RM4 750 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 FAM171BQ6P995 826 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 VSTM1Q6UX27 236 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 TMEM92Q6UXU6 159 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 TTC30AQ86WT1 665 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 SFR1Q86XK3 245 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 CSGALNACT2Q8N6G5 542 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 TXNDC5Q8NBS9 432 aaKnown RBP18.91■□□□□ 0.62
NUP50-218ENST00000493456 CXorf38Q8TB03 319 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 FNBP1Q96RU3 617 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 STRA6Q9BX79 667 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 IKZF4Q9H2S9 585 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 TRPM5Q9NZQ8 1165 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 MSRB2Q9Y3D2 182 aa18.91■□□□□ 0.62
NUP50-218ENST00000493456 PTPRDP23468 1912 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 MAP3K13O43283 966 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 HOXB3P14651 431 aaPredicted RBP18.9■□□□□ 0.62
NUP50-218ENST00000493456 ENGP17813 658 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 DDIT3P35638 169 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 MAPK8P45983 427 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 PPP3CCP48454 512 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 SLC7A9P82251 487 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 RBP5P82980 135 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 ZXDBP98169 803 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 MAPRE1Q15691 268 aaKnown RBP18.9■□□□□ 0.62
NUP50-218ENST00000493456 EOGTQ5NDL2 527 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 PEAR1Q5VY43 1037 aaPredicted RBP18.9■□□□□ 0.62
NUP50-218ENST00000493456 LYSMD4Q5XG99 296 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 SLC23A3Q6PIS1 610 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 DENND5BQ6ZUT9 1274 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 DPH6Q7L8W6 267 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 FILIP1Q7Z7B0 1213 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 ALLCQ8N6M5 410 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 IL17RCQ8NAC3 791 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 PNKPQ96T60 521 aa18.9■□□□□ 0.62
NUP50-218ENST00000493456 BCCIPQ9P287 314 aaKnown RBP eCLIP18.9■□□□□ 0.62
NUP50-218ENST00000493456 MAGEC2Q9UBF1 373 aaPredicted RBP18.9■□□□□ 0.62
NUP50-218ENST00000493456 TNRC6BQ9UPQ9 1833 aaKnown RBP18.9■□□□□ 0.62
NUP50-218ENST00000493456 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 H0Y626 953 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 TULP1O00294 542 aaPredicted RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 HYAL3O43820 417 aaPredicted RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 TRIM16O95361 564 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 KLF8O95600 359 aaPredicted RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 APODP05090 189 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 KRT19P08727 400 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 HNRNPLP14866 589 aaKnown RBP eCLIP18.89■□□□□ 0.61
NUP50-218ENST00000493456 GARTP22102 1010 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 ANXA13P27216 316 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 RDXP35241 583 aaKnown RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 PTGER3P43115 390 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 MYO1EQ12965 1108 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 DHCR24Q15392 516 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 SOWAHAQ2M3V2 549 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 L1TD1Q5T7N2 865 aaKnown RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 KIAA1211LQ6NV74 962 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 PIP4P1Q86T03 277 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 TMEFF1Q8IYR6 380 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 ADGRG2Q8IZP9 1017 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 RLN3Q8WXF3 142 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 MYLPFQ96A32 169 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 SAAL1Q96ER3 474 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 ACCSQ96QU6 501 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 KIF2CQ99661 725 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 SYT15Q9BQS2 421 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 TTLL2Q9BWV7 592 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 MRPL44Q9H9J2 332 aaKnown RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 CDH9Q9ULB4 789 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 CIZ1Q9ULV3 898 aaPredicted RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 R3HCC1Q9Y3T6 440 aaKnown RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 PLXND1Q9Y4D7 1925 aa18.89■□□□□ 0.61
NUP50-218ENST00000493456 ASCC3Q8N3C0 2202 aaKnown RBP18.89■□□□□ 0.61
NUP50-218ENST00000493456 A0A0A0MRY4 1105 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 ANTXRLA6NF34 631 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.88■□□□□ 0.61
NUP50-218ENST00000493456 SGK1O00141 431 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 TRIM66O15016 1216 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 KAT7O95251 611 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 OLFM2O95897 454 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 ADH1CP00326 375 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 TMEM191BP0C7N4 346 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 CHRM1P11229 460 aaPredicted RBP18.88■□□□□ 0.61
NUP50-218ENST00000493456 TIE1P35590 1138 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 GRIK1P39086 918 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 ATXN3P54252 364 aaPredicted RBP18.88■□□□□ 0.61
NUP50-218ENST00000493456 RESTQ13127 1097 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 SEMA3BQ13214 749 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 MAP7D1Q3KQU3 841 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 LRSAM1Q6UWE0 723 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 ARMCX6Q7L4S7 300 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 DDX42Q86XP3 938 aaKnown RBP eCLIP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms