RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CEP85Q6P2H3 762 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 C9orf106Q8NAJ2 232 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 C3orf20Q8ND61 904 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 ATRIPQ8WXE1 791 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 NRIP3Q9NQ35 241 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 ARHGEF3Q9NR81 526 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 TRHDEQ9UKU6 1024 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 POLHQ9Y253 713 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 RAD54BQ9Y620 910 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 EID1Q9Y6B2 187 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 KIF20BQ96Q89 1820 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 TUBGCP6Q96RT7 1819 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 ADGRB2O60241 1585 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 NRKQ7Z2Y5 1582 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 MSH6P52701 1360 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 MYOM1P52179 1685 aa4.13□□□□□ -1.75
PTCD3-218ENST00000493430 PXDNQ92626 1479 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 PRSS29PA6NIE9 313 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 VPS4BO75351 444 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 ARIH2O95376 493 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 FTH1P19P0C7X4 201 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 RARBP10826 455 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 CERS1P27544 350 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 PTGER1P34995 402 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 PIK3CGP48736 1102 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 ADKP55263 362 aaKnown RBP4.12□□□□□ -1.75
PTCD3-218ENST00000493430 ITKQ08881 620 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 MAPK7Q13164 816 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 PCBP2Q15366 365 aaKnown RBP eCLIP4.12□□□□□ -1.75
PTCD3-218ENST00000493430 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 TEDDM1Q5T9Z0 273 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 EGFLAMQ63HQ2 1017 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 C11orf87Q6NUJ2 197 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 PNMA8AQ86V59 439 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-218ENST00000493430 NELL2Q99435 816 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 BHMT2Q9H2M3 363 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 SPC25Q9HBM1 224 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 SLAMF7Q9NQ25 335 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 STK26Q9P289 416 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 SERGEFQ9UGK8 458 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 SERPINB13Q9UIV8 391 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 SHANK3Q9BYB0 1731 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 PIK3C2GO75747 1445 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 SETD5Q9C0A6 1442 aa4.12□□□□□ -1.75
PTCD3-218ENST00000493430 KIF20AO95235 890 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 LATS1O95835 1130 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 JUPP14923 745 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 CHRM3P20309 590 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 PRDX5P30044 214 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 PHKA1P46020 1223 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 GUCY2FP51841 1108 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 TUBA4AP68366 448 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 TCF15Q12870 199 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 MTMR1Q13613 665 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 KIF22Q14807 665 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF618Q5T7W0 954 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 THEMIS2Q5TEJ8 643 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 VPS53Q5VIR6 699 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 SLC29A4Q7RTT9 530 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 NEK8Q86SG6 692 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 FANCBQ8NB91 859 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 KLHDC4Q8TBB5 520 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 TBC1D5Q92609 795 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 RPL36ALQ969Q0 106 aaKnown RBP4.11□□□□□ -1.75
PTCD3-218ENST00000493430 MRPS18AQ9NVS2 196 aaKnown RBP4.11□□□□□ -1.75
PTCD3-218ENST00000493430 SH3BP4Q9P0V3 963 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 AGAP1Q9UPQ3 857 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 BTBD3Q9Y2F9 522 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 CCDC144AA2RUR9 1427 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 RGS12O14924 1447 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 MYOM2P54296 1465 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 C1orf167Q5SNV9 1468 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 TULP4Q9NRJ4 1543 aa4.11□□□□□ -1.75
PTCD3-218ENST00000493430 NUP188Q5SRE5 1749 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 COL18A1P39060 1754 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 LRRC14BA6NHZ5 514 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 FZD9O00144 591 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 GABRDO14764 452 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 IKBKBO14920 756 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 PPM1DO15297 605 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 TP73O15350 636 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 TOM1O60784 492 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 BMP15O95972 392 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 GNAI2P04899 355 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 EPHB2P29323 1055 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 GCLCP48506 637 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-218ENST00000493430 FXR1P51114 621 aaKnown RBP eCLIP4.1□□□□□ -1.75
PTCD3-218ENST00000493430 PROSER3Q2NL68 480 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 AARS2Q5JTZ9 985 aaKnown RBP4.1□□□□□ -1.75
PTCD3-218ENST00000493430 MORN5Q5VZ52 161 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 SFRP4Q6FHJ7 346 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-218ENST00000493430 ANKRD16Q6P6B7 361 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 BRINP3Q76B58 766 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 USP37Q86T82 979 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 DTX2Q86UW9 622 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 FAM90A1Q86YD7 464 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 MIER2Q8N344 545 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 FAM109AQ8N4B1 249 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 MTMR8Q96EF0 704 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms