RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 STKLD1Q8NE28 680 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 PDZD8Q8NEN9 1154 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 FBXO32Q969P5 355 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 MCRS1Q96EZ8 462 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 PKMYT1Q99640 499 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 HNRNPABQ99729 332 aaKnown RBP8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 FUCA2Q9BTY2 467 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 ZNF518BQ9C0D4 1074 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 NACA2Q9H009 215 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 CRISPLD1Q9H336 500 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 TRPC7Q9HCX4 862 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 COMMD8Q9NX08 183 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 GDE1Q9NZC3 331 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 HMGXB4Q9UGU5 601 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 CDH22Q9UJ99 828 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 CDH7Q9ULB5 785 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 C5orf42Q9H799 3197 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 DOCK8Q8NF50 2099 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 A0A1W2PRU2 124 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 C2CD4DB7Z1M9 353 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 M0QYV0 167 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 MICAL2O94851 1124 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 VNN2O95498 520 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 TPM1P09493 284 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 ATP1A3P13637 1013 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 ZNF18P17022 549 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 NPR3P17342 541 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 ATF6P18850 670 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 KRT9P35527 623 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 GPR15P49685 360 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 UBASH3AP57075 661 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 POLR2FP61218 127 aaKnown RBP8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 ZP2Q05996 745 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 BST2Q10589 180 aaKnown RBP8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 NCAPHQ15003 741 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 IQCB1Q15051 598 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 CCDC142Q17RM4 750 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 GOLGA7BQ2TAP0 167 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 GPR158Q5T848 1215 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 KLHDC7AQ5VTJ3 777 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 ARHGAP17Q68EM7 881 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 SMYD5Q6GMV2 418 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 TADA2BQ86TJ2 420 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 YAF2Q8IY57 180 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 ZDHHC14Q8IZN3 488 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 FUKQ8N0W3 1084 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 SIX6OS1Q8N1H7 587 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 ANKRD52Q8NB46 1076 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 LMO3Q8TAP4 145 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 WHAMMQ8TF30 809 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 GOLGA1Q92805 767 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 FGF13Q92913 245 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 NXPE3Q969Y0 559 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 E2F7Q96AV8 911 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 TRMT2BQ96GJ1 504 aaKnown RBP8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 NOX5Q96PH1 765 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 TWNKQ96RR1 684 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 DUSP16Q9BY84 665 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 LRRC4Q9HBW1 653 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 PLCB1Q9NQ66 1216 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 FAM207AQ9NSI2 230 aaPredicted RBP8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 IGSF9Q9P2J2 1179 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 LIMD1Q9UGP4 676 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 TSPAN16Q9UKR8 245 aa8.6□□□□□ -1.03
TM4SF1-204ENST00000493348 TRAV19A0A0A6YYK7 116 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 LRRC10BA6NIK2 292 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 LOC730098B7Z3J9 87 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 NOL4O94818 638 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 PAPLNO95428 1278 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 SETSIPP0DME0 302 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 LAMP2P13473 410 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 ALADP13716 330 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 UCHL3P15374 230 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 CEBPBP17676 345 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 ACO1P21399 889 aaKnown RBP8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 STAT1P42224 750 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 SLC5A3P53794 718 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 FANCCQ00597 558 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 GOLGA8FQ08AF8 430 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 GOLGA8DPQ0D2H9 430 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 DRAP1Q14919 205 aaPredicted RBP8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 TEAD2Q15562 447 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 CNGA2Q16280 664 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 GJB7Q6PEY0 223 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 ARHGAP18Q8N392 663 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 MSANTD4Q8NCY6 345 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 RNF214Q8ND24 703 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 TTC16Q8NEE8 873 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 ZNF397Q8NF99 534 aaPredicted RBP8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 ITFG1Q8TB96 612 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 OVCA2Q8WZ82 227 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 KAT5Q92993 513 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 TCEAL4Q96EI5 215 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 CDK5RAP1Q96SZ6 601 aaKnown RBP8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 KCNK16Q96T55 309 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 STK33Q9BYT3 514 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 TASP1Q9H6P5 420 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 SYNCQ9H7C4 482 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms