RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 TNK2Q07912 1038 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 EDRF1Q3B7T1 1238 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 ZCWPW2Q504Y3 356 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 COBLL1Q53SF7 1204 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 TXNDC11Q6PKC3 985 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 UNC93AQ86WB7 457 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 ADSSL1Q8N142 457 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 CRYBG2Q8N1P7 616 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 ENGASEQ8NFI3 743 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 CYP2S1Q96SQ9 504 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 GTPBP4Q9BZE4 634 aaKnown RBP12.23□□□□□ -0.45
LRTM1-202ENST00000493075 SMYD3Q9H7B4 428 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 HPS4Q9NQG7 708 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 RMND1Q9NWS8 449 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 COMMD8Q9NX08 183 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 ARHGAP26Q9UNA1 814 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 MAPK8IP1Q9UQF2 711 aa12.23□□□□□ -0.45
LRTM1-202ENST00000493075 ATP8B3O60423 1300 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 TRDMT1O14717 391 aaKnown RBP12.22□□□□□ -0.45
LRTM1-202ENST00000493075 RTN3O95197 1032 aaPredicted RBP12.22□□□□□ -0.45
LRTM1-202ENST00000493075 PAPSS2O95340 614 aaPredicted RBP12.22□□□□□ -0.45
LRTM1-202ENST00000493075 CKMP06732 381 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 TDGF1P13385 188 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 KRT13P13646 458 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 GTF2H1P32780 548 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 CXCL12P48061 93 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 USP46P62068 366 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 CCINQ13939 588 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 MTF1Q14872 753 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 ZNF77Q15935 545 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 PAQR9Q6ZVX9 377 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 ELOA2Q8IYF1 753 aaPredicted RBP12.22□□□□□ -0.45
LRTM1-202ENST00000493075 FAM186BQ8IYM0 893 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 NUP93Q8N1F7 819 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 ARL14EPQ8N8R7 260 aaPredicted RBP12.22□□□□□ -0.45
LRTM1-202ENST00000493075 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 TTC8Q8TAM2 541 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 SPATA20Q8TB22 786 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 OSCP1Q8WVF1 389 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 OVCA2Q8WZ82 227 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 EXOC4Q96A65 974 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 FAXDC2Q96IV6 333 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 TIGD1Q96MW7 591 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 GSDMAQ96QA5 445 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 SLC22A12Q96S37 553 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 SDCBP2Q9H190 292 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 TRPC7Q9HCX4 862 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 IL37Q9NZH6 218 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 USP34Q70CQ2 3546 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 COL4A3Q01955 1670 aa12.22□□□□□ -0.45
LRTM1-202ENST00000493075 ZFHX2Q9C0A1 2572 aaPredicted RBP12.22□□□□□ -0.45
LRTM1-202ENST00000493075 C2orf78A6NCI8 922 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 CLDN5O00501 218 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 OLFM2O95897 454 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 HLA-DRAP01903 254 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 CACNA2D1P54289 1103 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 SLC7A9P82251 487 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 TAF10Q12962 218 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 USP4Q13107 963 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 GAS6Q14393 721 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 PON2Q15165 354 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 TMEM196Q5HYL7 178 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 WDR44Q5JSH3 913 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 ZNF658Q5TYW1 1059 aaPredicted RBP12.21□□□□□ -0.45
LRTM1-202ENST00000493075 PDZD8Q8NEN9 1154 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 RIN3Q8TB24 985 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 SH3RF2Q8TEC5 729 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 SLITRK1Q96PX8 696 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 IMPG2Q9BZV3 1241 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 EBF3Q9H4W6 596 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 CYP3A43Q9HB55 503 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 TMEM30AQ9NV96 361 aa12.21□□□□□ -0.45
LRTM1-202ENST00000493075 DUS2Q9NX74 493 aaKnown RBP12.21□□□□□ -0.45
LRTM1-202ENST00000493075 HOOK1Q9UJC3 728 aaKnown RBP12.21□□□□□ -0.45
LRTM1-202ENST00000493075 FAM92AA1XBS5 289 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 OTOL1A6NHN0 477 aaPredicted RBP12.2□□□□□ -0.46
LRTM1-202ENST00000493075 TNFRSF10BO14763 440 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 CETN3O15182 167 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 STX10O60499 249 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 SMC2O95347 1197 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 TRIM21P19474 475 aaKnown RBP12.2□□□□□ -0.46
LRTM1-202ENST00000493075 YWHAQP27348 245 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 HOXA6P31267 233 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 PIK3CAP42336 1068 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 ASPAP45381 313 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 RAP1GAPP47736 663 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 GCLMP48507 274 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 IFNAR2P48551 515 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 PPP3CAQ08209 521 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 GRSF1Q12849 480 aaKnown RBP eCLIP12.2□□□□□ -0.46
LRTM1-202ENST00000493075 NR1H3Q13133 447 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 PNOCQ13519 176 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 SNX30Q5VWJ9 437 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 KRT39Q6A163 491 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 TRIM68Q6AZZ1 485 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 TSSK4Q6SA08 328 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 ACOT1Q86TX2 421 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 FAM35AQ86V20 835 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 FUKQ8N0W3 1084 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms