RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 DENND5BQ6ZUT9 1274 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 WDR5BQ86VZ2 330 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 C12orf56Q8IXR9 622 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 CPA6Q8N4T0 437 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 SPRYD3Q8NCJ5 442 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 OR6B3Q8NGW1 331 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 PLEKHO2Q8TD55 490 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 SH3RF2Q8TEC5 729 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 SNX25Q9H3E2 840 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 ECT2Q9H8V3 914 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 TMEM30AQ9NV96 361 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 POLR3BQ9NW08 1133 aaPredicted RBP16.77■□□□□ 0.28
SMPD4-220ENST00000491319 SERTAD1Q9UHV2 236 aa16.77■□□□□ 0.28
SMPD4-220ENST00000491319 CDV3Q9UKY7 258 aaKnown RBP16.77■□□□□ 0.28
SMPD4-220ENST00000491319 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.77■□□□□ 0.28
SMPD4-220ENST00000491319 MYO18AQ92614 2054 aaKnown RBP16.76■□□□□ 0.27
SMPD4-220ENST00000491319 F8VP50 259 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 TRIM66O15016 1216 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 RETP07949 1114 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 HOXA6P31267 233 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 GNL1P36915 607 aaPredicted RBP16.76■□□□□ 0.27
SMPD4-220ENST00000491319 GALK1P51570 392 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 CACNA2D1P54289 1103 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 MYL6P60660 151 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 TRPC3Q13507 836 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 EZH1Q92800 747 aaPredicted RBP16.76■□□□□ 0.27
SMPD4-220ENST00000491319 ATP2A3Q93084 1043 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 P2RY13Q9BPV8 354 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 XYLT2Q9H1B5 865 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 NXF1Q9UBU9 619 aaKnown RBP16.76■□□□□ 0.27
SMPD4-220ENST00000491319 ARHGAP26Q9UNA1 814 aa16.76■□□□□ 0.27
SMPD4-220ENST00000491319 PRR5-ARHGAP8B1AHC4 643 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 ACTN4O43707 911 aaKnown RBP16.75■□□□□ 0.27
SMPD4-220ENST00000491319 KLRC4O43908 158 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 EXOC3O60645 756 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 STAU1O95793 577 aaKnown RBP16.75■□□□□ 0.27
SMPD4-220ENST00000491319 PDIA4P13667 645 aaKnown RBP16.75■□□□□ 0.27
SMPD4-220ENST00000491319 PTPN1P18031 435 aaKnown RBP16.75■□□□□ 0.27
SMPD4-220ENST00000491319 HDCP19113 662 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 ATXN1P54253 815 aaKnown RBP16.75■□□□□ 0.27
SMPD4-220ENST00000491319 ARHGAP8P85298 464 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 ZXDBP98169 803 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 AMPD2Q01433 879 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 CEP68Q76N32 757 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 CEP57L1Q8IYX8 460 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 FAM160A2Q8N612 972 aaPredicted RBP16.75■□□□□ 0.27
SMPD4-220ENST00000491319 KIAA0895Q8NCT3 520 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 ELMO3Q96BJ8 720 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 CEP295NLQ96MC4 621 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 TTLL2Q9BWV7 592 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 SMYD3Q9H7B4 428 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 TRPM5Q9NZQ8 1165 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 CGNQ9P2M7 1197 aaKnown RBP16.75■□□□□ 0.27
SMPD4-220ENST00000491319 THADAQ6YHU6 1953 aa16.75■□□□□ 0.27
SMPD4-220ENST00000491319 CLDN5O00501 218 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 LRP3O75074 770 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 ATG13O75143 517 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 PHACTR2O75167 634 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 CLSTN1O94985 981 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 TCF3P15923 654 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 DRD1P21728 446 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 PDE6CP51160 858 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 NOP14P78316 857 aaKnown RBP16.74■□□□□ 0.27
SMPD4-220ENST00000491319 IFRD2Q12894 506 aaPredicted RBP16.74■□□□□ 0.27
SMPD4-220ENST00000491319 STK4Q13043 487 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 BIRC3Q13489 604 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 TDRD10Q5VZ19 366 aaKnown RBP16.74■□□□□ 0.27
SMPD4-220ENST00000491319 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 B3GALNT2Q8NCR0 500 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 CD101Q93033 1021 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 SYAP1Q96A49 352 aaPredicted RBP16.74■□□□□ 0.27
SMPD4-220ENST00000491319 C8orf48Q96LL4 319 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 HHIPQ96QV1 700 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 B3GNT5Q9BYG0 378 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 ELOVL4Q9GZR5 314 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 LINC00597Q9H2U6 94 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 SEMA4GQ9NTN9 838 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 RCOR1Q9UKL0 485 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 CFAP45Q9UL16 551 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 SLC8A2Q9UPR5 921 aa16.74■□□□□ 0.27
SMPD4-220ENST00000491319 ABCA7Q8IZY2 2146 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 ZNF840PA6NDX5 716 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
SMPD4-220ENST00000491319 A8MXQ7 604 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 LEFTY2O00292 366 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 SLFN14P0C7P3 912 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 SDHBP21912 280 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 ATICP31939 592 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 RAP1GAPP47736 663 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 ZNF699Q32M78 642 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 SCARA5Q6ZMJ2 495 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 PRR23CQ6ZRP0 262 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 RPLP0P6Q8NHW5 317 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 PARD3BQ8TEW8 1205 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 GAB3Q8WWW8 586 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 PAGE5Q96GU1 130 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 RNF38Q9H0F5 515 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms