RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 GUF1Q8N442 669 aaKnown RBP19.18■□□□□ 0.66
HMGN1-219ENST00000491183 CCDC47Q96A33 483 aaKnown RBP19.18■□□□□ 0.66
HMGN1-219ENST00000491183 PCDHGA2Q9Y5H1 932 aa19.18■□□□□ 0.66
HMGN1-219ENST00000491183 IKBKBO14920 756 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 AKAP3O75969 853 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 KIF20AO95235 890 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 HDCP19113 662 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 ANXA13P27216 316 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 NOP14P78316 857 aaKnown RBP19.17■□□□□ 0.66
HMGN1-219ENST00000491183 SATB1Q01826 763 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 LRRC32Q14392 662 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 ZNF77Q15935 545 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 NFIL3Q16649 462 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 SGSM1Q2NKQ1 1148 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 SCARA5Q6ZMJ2 495 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 Q6ZS52 159 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 PAQR9Q6ZVX9 377 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 ATRIPQ8WXE1 791 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 ELOVL4Q9GZR5 314 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 FRMD4BQ9Y2L6 1034 aa19.17■□□□□ 0.66
HMGN1-219ENST00000491183 MAPK13O15264 365 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 CKMP06732 381 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 NR2F2P24468 414 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 CXCL12P48061 93 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 CCR3P51677 355 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 VAMP7P51809 220 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 ZXDBP98169 803 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 CCINQ13939 588 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 MTF1Q14872 753 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 ZCWPW2Q504Y3 356 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 DGKKQ5KSL6 1271 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 SPOPLQ6IQ16 392 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 CC2D1AQ6P1N0 951 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-219ENST00000491183 FMR1NBQ8N0W7 255 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-219ENST00000491183 SPEM1Q8N4L4 309 aa19.16■□□□□ 0.66
HMGN1-219ENST00000491183 ZNF840PA6NDX5 716 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 HLA-DRAP01903 254 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 PPP3CAQ08209 521 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 USP4Q13107 963 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 BECN1Q14457 450 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 PDGFRLQ15198 375 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 DCLK2Q8N568 766 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 SH3RF2Q8TEC5 729 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 KCNK16Q96T55 309 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 FAM126AQ9BYI3 521 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-219ENST00000491183 RNF38Q9H0F5 515 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 FBRSL1Q9HCM7 1045 aaKnown RBP19.15■□□□□ 0.66
HMGN1-219ENST00000491183 C2orf42Q9NWW7 574 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 TRPM5Q9NZQ8 1165 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 WNT6Q9Y6F9 365 aa19.15■□□□□ 0.66
HMGN1-219ENST00000491183 HELZP42694 1942 aaKnown RBP19.15■□□□□ 0.66
HMGN1-219ENST00000491183 CLSTN1O94985 981 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 ASS1P00966 412 aaKnown RBP19.14■□□□□ 0.65
HMGN1-219ENST00000491183 TCF3P15923 654 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 HOXC13P31276 330 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 TAF10Q12962 218 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 ADAM9Q13443 819 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 PNOCQ13519 176 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 TMEM196Q5HYL7 178 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 FSTL4Q6MZW2 842 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 ACOT1Q86TX2 421 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 SMYD4Q8IYR2 804 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-219ENST00000491183 TTC16Q8NEE8 873 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 ENGASEQ8NFI3 743 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 OSCP1Q8WVF1 389 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 TAF4BQ92750 862 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 TNIP3Q96KP6 325 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 LINC00597Q9H2U6 94 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.14■□□□□ 0.651e-9■■■■■ 62.2
HMGN1-219ENST00000491183 DUS2Q9NX74 493 aaKnown RBP19.14■□□□□ 0.65
HMGN1-219ENST00000491183 EHD2Q9NZN4 543 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 HMGXB4Q9UGU5 601 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 ARHGAP26Q9UNA1 814 aa19.14■□□□□ 0.65
HMGN1-219ENST00000491183 TRDMT1O14717 391 aaKnown RBP19.13■□□□□ 0.65
HMGN1-219ENST00000491183 TRIM49P0CI25 452 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 TRIM49CP0CI26 452 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 PFKLP17858 780 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 PSMC2P35998 433 aaKnown RBP19.13■□□□□ 0.65
HMGN1-219ENST00000491183 PIK3CAP42336 1068 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 ASPAP45381 313 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 PPP3CCP48454 512 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 GCLMP48507 274 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 GALK1P51570 392 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 NDST1P52848 882 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 MCCD1P59942 119 aaPredicted RBP19.13■□□□□ 0.65
HMGN1-219ENST00000491183 NUCB2P80303 420 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 DMWDQ09019 674 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 ORC1Q13415 861 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 EML3Q32P44 896 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 NAIF1Q69YI7 327 aaPredicted RBP19.13■□□□□ 0.65
HMGN1-219ENST00000491183 INTS8Q75QN2 995 aaKnown RBP19.13■□□□□ 0.65
HMGN1-219ENST00000491183 FAM35AQ86V20 835 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 FAM186BQ8IYM0 893 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 FUKQ8N0W3 1084 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 NUP93Q8N1F7 819 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 CRYBG2Q8N1P7 616 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 SYNPOQ8N3V7 929 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 RUBCNQ92622 972 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 EPC1Q9H2F5 836 aa19.13■□□□□ 0.65
HMGN1-219ENST00000491183 ECT2Q9H8V3 914 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms