RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 UGT1A10Q9HAW8 530 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 UGT1A8Q9HAW9 530 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 EURLQ9NYK6 297 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 PMM2O15305 246 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 GSC2O15499 205 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 KCNN4O15554 427 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 LINGO3P0C6S8 592 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 SKIV2L2P42285 1042 aaKnown RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 PIGHQ14442 188 aaPredicted RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 PARP6Q2NL67 630 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 C15orf59Q2T9L4 293 aaPredicted RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 SLC45A4Q5BKX6 768 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 NIPA1Q7RTP0 329 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 BTBD10Q9BSF8 475 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 PDGFDQ9GZP0 370 aaPredicted RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 DCLRE1BQ9H816 532 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 TAS2R1Q9NYW7 299 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 ZNRF3Q9ULT6 936 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 GINS2Q9Y248 185 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 CCDC189A1A4V9 331 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 I3L4J1 428 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 C2CD2LO14523 706 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 LRCH4O75427 683 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 RASA2Q15283 850 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 NBPF12Q5TAG4 269 aaPredicted RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 WDTC1Q8N5D0 677 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 FBXO27Q8NI29 283 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 TRAPPC12Q8WVT3 735 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 PCMTD2Q9NV79 361 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 KANSL3Q9P2N6 904 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 SLC24A2Q9UI40 661 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 SHOC2Q9UQ13 582 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 IQANK1A0A1B0GTG1 560 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 TCRBV9S1A1TA0A576 114 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 MEI4A8MW99 385 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 E5RJQ4 531 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 MAP3K13O43283 966 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS72-205ENST00000491094 KCNA2P16389 499 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 EPHB1P54762 984 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 KRT81Q14533 505 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 SGSM1Q2NKQ1 1148 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 KLHL38Q2WGJ6 581 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 SLFN12LQ6IEE8 588 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 C15orf39Q6ZRI6 1047 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 CDHR3Q6ZTQ4 885 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 NIM1KQ8IY84 436 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS72-205ENST00000491094 FBXO41Q8TF61 875 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 TEKT4Q8WW24 435 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 HEXIM2Q96MH2 286 aaKnown RBP11.65□□□□□ -0.54
VPS72-205ENST00000491094 CGRRF1Q99675 332 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 CYP4F11Q9HBI6 524 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS72-205ENST00000491094 G3BP2Q9UN86 482 aaKnown RBP11.65□□□□□ -0.54
VPS72-205ENST00000491094 TBX10O75333 385 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 AMPD1P23109 780 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 KDELR1P24390 212 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 MIPP30301 263 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 CHI3L2Q15782 390 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 DUOXA2Q1HG44 320 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 POU5F2Q8N7G0 328 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 INPP5DQ92835 1189 aa11.65□□□□□ -0.54
VPS72-205ENST00000491094 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.54
VPS72-205ENST00000491094 USP1O94782 785 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 GNAT1P11488 350 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 GNAZP19086 355 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 SARNPP82979 210 aaKnown RBP11.65□□□□□ -0.55
VPS72-205ENST00000491094 DPYSL3Q14195 570 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 EFHC2Q5JST6 749 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 C16orf46Q6P387 395 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 AGR3Q8TD06 166 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 CPXM1Q96SM3 734 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 FOXP3Q9BZS1 431 aa11.65□□□□□ -0.55
VPS72-205ENST00000491094 COL24A1Q17RW2 1714 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 LOC100653049A0A140TA62 436 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 KRT34O76011 436 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 POLR2BP30876 1174 aaKnown RBP11.64□□□□□ -0.55
VPS72-205ENST00000491094 SERPINB4P48594 390 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 CXCL9Q07325 125 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 NUDCD3Q8IVD9 361 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 USP6NLQ92738 828 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 VCPIP1Q96JH7 1222 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 ACSS3Q9H6R3 686 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 C17orf75Q9HAS0 396 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 M0QYV0 167 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 LDHAP00338 332 aaKnown RBP11.64□□□□□ -0.55
VPS72-205ENST00000491094 CCDC15Q0P6D6 951 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 CCDC110Q8TBZ0 833 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 SRPK1Q96SB4 655 aaKnown RBP11.64□□□□□ -0.55
VPS72-205ENST00000491094 MMP19Q99542 508 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 ADPGKQ9BRR6 497 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 WDR83Q9BRX9 315 aaKnown RBP11.64□□□□□ -0.55
VPS72-205ENST00000491094 APOL6Q9BWW8 343 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 NIF3L1Q9GZT8 377 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 PACSIN3Q9UKS6 424 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 DRG1Q9Y295 367 aaKnown RBP11.64□□□□□ -0.55
VPS72-205ENST00000491094 AQP5P55064 265 aa11.64□□□□□ -0.55
VPS72-205ENST00000491094 CRADDP78560 199 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms