RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 F9P00740 461 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 ERBB2P04626 1255 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 PAMP19021 973 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 CA8P35219 290 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SLC6A3Q01959 620 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 MBTD1Q05BQ5 628 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SNCBQ16143 134 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 BTBD8Q5XKL5 378 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 CDCA2Q69YH5 1023 aaPredicted RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 FAM172AQ8WUF8 416 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 DDX27Q96GQ7 796 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SYT17Q9BSW7 474 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 TRIM55Q9BYV6 548 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 RRN3Q9NYV6 651 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 TMEM191CA6NGB0 347 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 EEF2KO00418 725 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 CYB561D2O14569 222 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 LPXNO60711 386 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 GRAP2O75791 330 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 ZWINTO95229 277 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SMIM10L2AP0DMW4 78 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SMIM10L2BP0DMW5 78 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 ZNF200P98182 395 aaPredicted RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SP2Q02086 613 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 ITKQ08881 620 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 PPP2R5DQ14738 602 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 DENND1BQ6P3S1 775 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 MFSD7Q6UXD7 560 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 C4orf50Q6ZRC1 276 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SPATA2LQ8IUW3 424 aaPredicted RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 CCNJLQ8IV13 435 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 ANKMY2Q8IV38 441 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 FAM71DQ8N9W8 422 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 PCSK9Q8NBP7 692 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 PPFIBP2Q8ND30 876 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 APBB2Q92870 758 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SH3GL2Q99962 352 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 FAM118BQ9BPY3 351 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 TMEM120BA0PK00 339 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 CAND2O75155 1236 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 MMP3P08254 477 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 UNGP13051 313 aaPredicted RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SPOUT1Q5T280 376 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 EEF1DP3Q658K8 133 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 RWDD4Q6NW29 188 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 DCP1BQ8IZD4 617 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 IQCKQ8N0W5 287 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 ZCCHC9Q8N567 271 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 PPM1NQ8N819 430 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 LMO3Q8TAP4 145 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 DNAJB3Q8WWF6 145 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 ELMO3Q96BJ8 720 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 RSRC1Q96IZ7 334 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 TRPV6Q9H1D0 765 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 SEMA4AQ9H3S1 761 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 PDGFCQ9NRA1 345 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 FAM53CQ9NYF3 392 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 TLK1Q9UKI8 766 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 ARL2BPQ9Y2Y0 163 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 GOLGA8QA0A0J9YX86 632 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 GOLGA8OA6NCC3 632 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 LRRC37AA6NMS7 1700 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 GOLGA8NF8WBI6 632 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 APOC4-APOC2K7ER74 178 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 APOC2P02655 101 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 EDNRBP24530 442 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 NR2C2P49116 596 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 GTF2A1P52655 376 aaPredicted RBP7.66□□□□□ -1.18
NPHP3-208ENST00000490993 ZNF143P52747 638 aaPredicted RBP7.66□□□□□ -1.18
NPHP3-208ENST00000490993 IRX5P78411 483 aaPredicted RBP7.66□□□□□ -1.18
NPHP3-208ENST00000490993 ORC1Q13415 861 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 FAM187BQ17R55 369 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 CCDC38Q502W7 563 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 GLRA4Q5JXX5 417 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 SLC39A4Q6P5W5 647 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 C3orf62Q6ZUJ4 267 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 FNIP1Q8TF40 1166 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 CENPTQ96BT3 561 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 SEC16BQ96JE7 1060 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 SMYD3Q9H7B4 428 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 ZC3H7BQ9UGR2 993 aaKnown RBP7.66□□□□□ -1.18
NPHP3-208ENST00000490993 TMEM59LQ9UK28 342 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 CFAP73A6NFT4 308 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 KPNA7A9QM74 516 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 BTBD19C9JJ37 291 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 B4GALT5O43286 388 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 THP07101 528 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 KDELR1P24390 212 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 MARCKSL1P49006 195 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 CDH8P55286 799 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 THOC5Q13769 683 aaKnown RBP7.66□□□□□ -1.18
NPHP3-208ENST00000490993 TTMPQ5BVD1 217 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 ERMARDQ5T6L9 678 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 SPATA21Q7Z572 469 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 RNF180Q86T96 592 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 PALB2Q86YC2 1186 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 ACTL9Q8TC94 416 aa7.66□□□□□ -1.18
NPHP3-208ENST00000490993 EPS8L3Q8TE67 593 aaKnown RBP7.66□□□□□ -1.18
NPHP3-208ENST00000490993 TFB1MQ8WVM0 346 aaKnown RBP7.66□□□□□ -1.18
NPHP3-208ENST00000490993 KLHL29Q96CT2 875 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms