RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CCDC90BQ9GZT6 254 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 DNAJB4Q9UDY4 337 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 TDRKHQ9Y2W6 561 aaKnown RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 MYH13Q9UKX3 1938 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 ATP8B3O60423 1300 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 C1orf232A0A0U1RR37 186 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 E9PBE3 544 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 KLHL41O60662 606 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 OAS1P00973 400 aaKnown RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 PEX2P28328 305 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 ACTR3P61158 418 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 BMPR2Q13873 1038 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 MPP2Q14168 576 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 CDO1Q16878 200 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 TBC1D25Q3MII6 688 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 OR52E8Q6IFG1 317 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 DENND5BQ6ZUT9 1274 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 C16orf86Q6ZW13 317 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 ZNF720Q7Z2F6 126 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 LRRC4CQ9HCJ2 640 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 NGRNQ9NPE2 291 aaKnown RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 C6orf203Q9P0P8 240 aaPredicted RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 DAPK2Q9UIK4 370 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 TRIM43BA6NCK2 446 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 LSM1O15116 133 aaKnown RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 KCNN4O15554 427 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 MED7O43513 233 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 TGDSO95455 350 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 CDH3P22223 829 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 ELK3P41970 407 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 SERPINB10P48595 397 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 SLC12A3P55017 1021 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 AQP4P55087 323 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 CDH6P55285 790 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 RPL10AP62906 217 aaKnown RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 CLEC16AQ2KHT3 1053 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 ZBTB49Q6ZSB9 765 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 KYQ8NBH2 561 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 PI4K2AQ9BTU6 479 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 RIOX1Q9H6W3 641 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 GTSE1Q9NYZ3 720 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 ASTN1O14525 1302 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 A0A087WXM4 84 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 ZNF839A8K0R7 811 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 SYCE1LA8MT33 242 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 ZBTB39O15060 712 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 PEX1O43933 1283 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 TNNC2P02585 160 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 SERPINA6P08185 405 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 RARBP10826 455 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 MTMR2Q13614 643 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 PPP6R3Q5H9R7 873 aaPredicted RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 LMBRD2Q68DH5 695 aaPredicted RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 SPOCD1Q6ZMY3 1216 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 ZCCHC23Q6ZST2 131 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 LRP10Q7Z4F1 713 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 TTC7BQ86TV6 843 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 MCOLN2Q8IZK6 566 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 C12orf50Q8NA57 414 aaPredicted RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 DCAF4Q8WV16 495 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 KIFC3Q9BVG8 833 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 FRMD8Q9BZ67 464 aaPredicted RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 EFCAB1Q9HAE3 211 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 PAK5Q9P286 719 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 NFAT5O94916 1531 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 PIK3R2O00459 728 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 GNGT2O14610 69 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 XPOTO43592 962 aaKnown RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 DCXO43602 365 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 GLRA3O75311 464 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 CYP1A2P05177 515 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 CCDC130P13994 396 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 JAM2P57087 298 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 UBAP2LQ14157 1087 aaKnown RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 CYP1B1Q16678 543 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 SMTNL2Q2TAL5 461 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 PALB2Q86YC2 1186 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 PQLC1Q8N2U9 271 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 TTC16Q8NEE8 873 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 ACTL9Q8TC94 416 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 HDAC11Q96DB2 347 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 SHISA4Q96DD7 197 aa11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 NXF1Q9UBU9 619 aaKnown RBP11.73□□□□□ -0.53
CRNKL1-204ENST00000490910 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ALOX15BO15296 676 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 GRK2P25098 689 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 SCNN1DP51172 638 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 SIK1P57059 783 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 INPP5AQ14642 412 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 RGS21Q2M5E4 152 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 FASTKD1Q53R41 847 aaKnown RBP11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 CCNYQ8ND76 341 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 DCUN1D1Q96GG9 259 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 CBWD1Q9BRT8 395 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ACSS3Q9H6R3 686 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ASNSD1Q9NWL6 643 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 MAGED2Q9UNF1 606 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms