RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ABCD1P33897 745 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 ALDH1A3P47895 512 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 SOX9P48436 509 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 CASP4P49662 377 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 CYP2J2P51589 502 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 EPHB3P54753 998 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 RBP5P82980 135 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 POU5F1Q01860 360 aaKnown RBP7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 STK4Q13043 487 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 PLD1Q13393 1074 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 UBXN2BQ14CS0 331 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 SOWAHAQ2M3V2 549 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 SV2CQ496J9 727 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 CNNM4Q6P4Q7 775 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 TPRG1Q6ZUI0 275 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 TMEM150AQ86TG1 271 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 METTL23Q86XA0 190 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 ARID3BQ8IVW6 561 aaPredicted RBP7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 THEM5Q8N1Q8 247 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 ELMOD1Q8N336 334 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 PJA1Q8NG27 643 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 RIN3Q8TB24 985 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 FAM200AQ8TCP9 573 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 LEO1Q8WVC0 666 aaPredicted RBP7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 SMARCD2Q92925 531 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 PSMG2Q969U7 264 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 ZFYVE19Q96K21 471 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 PKMYT1Q99640 499 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 SLC46A2Q9BY10 475 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 ATXN3LQ9H3M9 355 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 GDPD2Q9HCC8 539 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 LTB4R2Q9NPC1 389 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 ASAH2Q9NR71 780 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 AGPAT3Q9NRZ7 376 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 DDX43Q9NXZ2 648 aaKnown RBP7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 ABI2Q9NYB9 513 aaPredicted RBP7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 SNX9Q9Y5X1 595 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 ACACBO00763 2458 aa7.86□□□□□ -1.15
PRPF4B-208ENST00000490653 TPRP12270 2363 aaKnown RBP7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 USP24Q9UPU5 2620 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 CACNA1BQ00975 2339 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 GABRDO14764 452 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 OIP5O43482 229 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 PRPF40AO75400 957 aaKnown RBP7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 PFKFB1P16118 471 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 MX2P20592 715 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 RFX1P22670 979 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 AMPD3Q01432 767 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 CLN3Q13286 438 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 ALCAMQ13740 583 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 GPR158Q5T848 1215 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 TSSK4Q6SA08 328 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 TRAPPC11Q7Z392 1133 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 DGLUCYQ7Z3D6 616 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 LIMS2Q7Z4I7 341 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 NT5DC4Q86YG4 428 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 MFSD6LQ8IWD5 586 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 KIAA0895Q8NCT3 520 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 KCNG4Q8TDN1 519 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 CACTINQ8WUQ7 758 aaKnown RBP7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 KBTBD7Q8WVZ9 684 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 NELL1Q92832 810 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 CCDC127Q96BQ5 260 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 HPDLQ96IR7 371 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 MRPL45Q9BRJ2 306 aaKnown RBP7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 TRMT61BQ9BVS5 477 aaKnown RBP7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 OXCT2Q9BYC2 517 aaPredicted RBP7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 LRRC27Q9C0I9 530 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 CUEDC2Q9H467 287 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 GOLPH3LQ9H4A5 285 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 BRD9Q9H8M2 597 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 TRPV4Q9HBA0 871 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 PARD6AQ9NPB6 346 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 CRTAC1Q9NQ79 661 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 GDAP2Q9NXN4 497 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 FAM13BQ9NYF5 915 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 DSEQ9UL01 958 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 MAFFQ9ULX9 164 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 NDRG2Q9UN36 371 aaKnown RBP7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 MAGED2Q9UNF1 606 aaPredicted RBP7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 HPSEQ9Y251 543 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 PCDHB9Q9Y5E1 797 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 ATG2BQ96BY7 2078 aa7.85□□□□□ -1.15
PRPF4B-208ENST00000490653 CHD6Q8TD26 2715 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 ARNTLO00327 626 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 EIF3DO15371 548 aaKnown RBP eCLIP7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 HUS1O60921 280 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 TADA3O75528 432 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 PRAMEF12O95522 483 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 TMEM191BP0C7N4 346 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 SLFN14P0C7P3 912 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 DLATP10515 647 aaKnown RBP7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 PSMC3P17980 439 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 CMA1P23946 247 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 CCNE1P24864 410 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 TUFMP49411 452 aaKnown RBP7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 NDUFA8P51970 172 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 CACNA2D1P54289 1103 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 CDH8P55286 799 aa7.84□□□□□ -1.15
PRPF4B-208ENST00000490653 PSMC1P62191 440 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms