RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 CCDC34Q96HJ3 373 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 CYP2S1Q96SQ9 504 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 HINFPQ9BQA5 517 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 FAM83CQ9BQN1 747 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 IER2Q9BTL4 223 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 B3GNT5Q9BYG0 378 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 SEMA4AQ9H3S1 761 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 MMRN2Q9H8L6 949 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 HPS4Q9NQG7 708 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.03□□□□□ -0.648e-7■■■■■ 33.1
RBM39-236ENST00000490484 GKN1Q9NS71 199 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 TMEM30AQ9NV96 361 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 HMGXB4Q9UGU5 601 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 TRAF3IP3Q9Y228 551 aa11.03□□□□□ -0.64
RBM39-236ENST00000490484 HELZP42694 1942 aaKnown RBP11.03□□□□□ -0.64
RBM39-236ENST00000490484 EP300Q09472 2414 aaPredicted RBP11.03□□□□□ -0.64
RBM39-236ENST00000490484 GPR179Q6PRD1 2367 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 ANAPC1Q9H1A4 1944 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 GOLGA6L4A6NEF3 574 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 OTOL1A6NHN0 477 aaPredicted RBP11.02□□□□□ -0.65
RBM39-236ENST00000490484 SOBPA7XYQ1 873 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 FAM163BP0C2L3 166 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 USP17L7P0C7H9 530 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 P4HA1P13674 534 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 ASPAP45381 313 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 CCR3P51677 355 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 NOP14P78316 857 aaKnown RBP11.02□□□□□ -0.65
RBM39-236ENST00000490484 SATB1Q01826 763 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 USP4Q13107 963 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 RUNX3Q13761 415 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 GAS6Q14393 721 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 PPP2R5DQ14738 602 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 ZNF77Q15935 545 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 SGSM1Q2NKQ1 1148 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 C1orf220Q5T0J3 134 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 SPOPLQ6IQ16 392 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 INTS8Q75QN2 995 aaKnown RBP11.02□□□□□ -0.65
RBM39-236ENST00000490484 FAM35AQ86V20 835 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 FAM186BQ8IYM0 893 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 GUF1Q8N442 669 aaKnown RBP11.02□□□□□ -0.65
RBM39-236ENST00000490484 ATRIPQ8WXE1 791 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 C8orf48Q96LL4 319 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 CEP295NLQ96MC4 621 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 MED10Q9BTT4 135 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 KRT82Q9NSB4 513 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 ZSCAN32Q9NX65 697 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 EHD2Q9NZN4 543 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 TRPM5Q9NZQ8 1165 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 GCNT4Q9P109 453 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 PCDHGA2Q9Y5H1 932 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 WNT6Q9Y6F9 365 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 ATP8B3O60423 1300 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 OTOGLQ3ZCN5 2332 aa11.02□□□□□ -0.65
RBM39-236ENST00000490484 DCHS1Q96JQ0 3298 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 IKBKBO14920 756 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 MAPK13O15264 365 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 ABL1P00519 1130 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 ASS1P00966 412 aaKnown RBP11.01□□□□□ -0.65
RBM39-236ENST00000490484 HLA-DRAP01903 254 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 TDGF1P13385 188 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 KRT13P13646 458 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 CCDC130P13994 396 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 HDCP19113 662 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 RPL13P26373 211 aaKnown RBP11.01□□□□□ -0.65
RBM39-236ENST00000490484 GCLMP48507 274 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 IFNAR2P48551 515 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 PDE6CP51160 858 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 NUCB2P80303 420 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 TAF10Q12962 218 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 CCINQ13939 588 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 PDGFRLQ15198 375 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 NFIL3Q16649 462 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 ZCWPW2Q504Y3 356 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 ACOT1Q86TX2 421 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 FMR1NBQ8N0W7 255 aaPredicted RBP11.01□□□□□ -0.65
RBM39-236ENST00000490484 CPA6Q8N4T0 437 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 ZBTB44Q8NCP5 570 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 SH3RF2Q8TEC5 729 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 OSCP1Q8WVF1 389 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 CHFRQ96EP1 664 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 SMARCD1Q96GM5 515 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 TNIP3Q96KP6 325 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 SLITRK1Q96PX8 696 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 KCNK16Q96T55 309 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 TTLL2Q9BWV7 592 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 IMPG2Q9BZV3 1241 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 DUS2Q9NX74 493 aaKnown RBP11.01□□□□□ -0.65
RBM39-236ENST00000490484 ARHGAP26Q9UNA1 814 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 SPTBN4Q9H254 2564 aa11.01□□□□□ -0.65
RBM39-236ENST00000490484 ZNF840PA6NDX5 716 aa11□□□□□ -0.65
RBM39-236ENST00000490484 SCAMP3O14828 347 aaKnown RBP11□□□□□ -0.65
RBM39-236ENST00000490484 PSMC2P35998 433 aaKnown RBP11□□□□□ -0.65
RBM39-236ENST00000490484 CXCL12P48061 93 aa11□□□□□ -0.65
RBM39-236ENST00000490484 NDST1P52848 882 aa11□□□□□ -0.65
RBM39-236ENST00000490484 SLC5A3P53794 718 aa11□□□□□ -0.65
RBM39-236ENST00000490484 PPP3CAQ08209 521 aa11□□□□□ -0.65
RBM39-236ENST00000490484 GRSF1Q12849 480 aaKnown RBP eCLIP11□□□□□ -0.65
RBM39-236ENST00000490484 ADAM9Q13443 819 aa11□□□□□ -0.65
RBM39-236ENST00000490484 DGKKQ5KSL6 1271 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms