RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 OLFML1Q6UWY5 402 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 C4orf50Q6ZRC1 276 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.8■■□□□ 1.24
SMC4-221ENST00000489573 COG1Q8WTW3 980 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 KCTD13Q8WZ19 329 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 IGSF21Q96ID5 467 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 SMOQ99835 787 aa22.8■■□□□ 1.24
SMC4-221ENST00000489573 MRPL42Q9Y6G3 142 aaKnown RBP22.8■■□□□ 1.24
SMC4-221ENST00000489573 OR6C75A6NL08 312 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 KCNK3O14649 394 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 DDX3YO15523 660 aaKnown RBP22.79■■□□□ 1.24
SMC4-221ENST00000489573 PAPSS1O43252 624 aaPredicted RBP22.79■■□□□ 1.24
SMC4-221ENST00000489573 SYN1P17600 705 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 CXCR5P32302 372 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 CDR1P51861 262 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 CPNE8Q86YQ8 564 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 SPATA2LQ8IUW3 424 aaPredicted RBP22.79■■□□□ 1.24
SMC4-221ENST00000489573 JOSD2Q8TAC2 188 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 CD101Q93033 1021 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 B3GALT6Q96L58 329 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.79■■□□□ 1.242e-9■■■■■ 123.9
SMC4-221ENST00000489573 TTPALQ9BTX7 342 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 CARD6Q9BX69 1037 aa22.79■■□□□ 1.24
SMC4-221ENST00000489573 VWA8A3KMH1 1905 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 H7C4K7 107 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 CES2O00748 559 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 ZNF185O15231 689 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 EFEMP2O95967 443 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 OR4Q2P0C623 313 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 LCP1P13796 627 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 CTNNA2P26232 953 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 RFC1P35251 1148 aaPredicted RBP22.78■■□□□ 1.24
SMC4-221ENST00000489573 SCNN1AP37088 669 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 SLC6A3Q01959 620 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 OGDHQ02218 1023 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 ZNF252P-AS1Q0IIN9 211 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 SLC39A12Q504Y0 691 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 SLC39A11Q8N1S5 342 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 UBL4BQ8N7F7 174 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 CEP112Q8N8E3 955 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 MYRIPQ8NFW9 859 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 FNIP1Q8TF40 1166 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 PBKQ96KB5 322 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 CAPZA3Q96KX2 299 aa22.78■■□□□ 1.24
SMC4-221ENST00000489573 GJB5O95377 273 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 BDNFP23560 247 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 CTNNA1P35221 906 aaKnown RBP22.77■■□□□ 1.24
SMC4-221ENST00000489573 CACNA2D1P54289 1103 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 CKAP4Q07065 602 aaKnown RBP22.77■■□□□ 1.24
SMC4-221ENST00000489573 PIGHQ14442 188 aaPredicted RBP22.77■■□□□ 1.24
SMC4-221ENST00000489573 RTP2Q5QGT7 225 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 ANKS3Q6ZW76 656 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 RNF168Q8IYW5 571 aaPredicted RBP22.77■■□□□ 1.24
SMC4-221ENST00000489573 NIPA2Q8N8Q9 360 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 COLGALT1Q8NBJ5 622 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 MNS1Q8NEH6 495 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 ZMIZ2Q8NF64 920 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 PIWIL1Q96J94 861 aaKnown RBP22.77■■□□□ 1.24
SMC4-221ENST00000489573 OXCT2Q9BYC2 517 aaPredicted RBP22.77■■□□□ 1.24
SMC4-221ENST00000489573 RHOBTB2Q9BYZ6 727 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 UBXN6Q9BZV1 441 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 LRRC4Q9HBW1 653 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 CSNK1G1Q9HCP0 422 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 DMAP1Q9NPF5 467 aaPredicted RBP22.77■■□□□ 1.24
SMC4-221ENST00000489573 ZMYND8Q9ULU4 1186 aaPredicted RBP22.77■■□□□ 1.24
SMC4-221ENST00000489573 PTPRSQ13332 1948 aa22.77■■□□□ 1.24
SMC4-221ENST00000489573 CCDC66A2RUB6 948 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 HTRA4P83105 476 aaPredicted RBP22.76■■□□□ 1.23
SMC4-221ENST00000489573 ADIGQ0VDE8 80 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 NFE2Q16621 373 aaPredicted RBP22.76■■□□□ 1.23
SMC4-221ENST00000489573 TAS1R1Q7RTX1 841 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 CREG2Q8IUH2 290 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 SCUBE3Q8IX30 993 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 EMC1Q8N766 993 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 HERVK_113Q902F9 699 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 TMEM30AQ9NV96 361 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 CXXC1Q9P0U4 656 aaPredicted RBP22.76■■□□□ 1.23
SMC4-221ENST00000489573 TMEM59LQ9UK28 342 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 PSMA2P25787 234 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 USP41Q3LFD5 358 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 SIX6OS1Q8N1H7 587 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 KRT35Q92764 455 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 TMEM169Q96HH4 297 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 KCNK16Q96T55 309 aa22.76■■□□□ 1.23
SMC4-221ENST00000489573 CCDC181Q5TID7 509 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 SLC26A9Q7LBE3 791 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 CLEC4CQ8WTT0 213 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 FUBP3Q96I24 572 aaKnown RBP eCLIP22.75■■□□□ 1.23
SMC4-221ENST00000489573 SLC9A7Q96T83 725 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 LBHD1Q9BQE6 289 aaPredicted RBP22.75■■□□□ 1.23
SMC4-221ENST00000489573 VN1R3Q9BXE9 311 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 SPG21Q9NZD8 308 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 RNF14Q9UBS8 474 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 USTQ9Y2C2 406 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 PCDHA3Q9Y5H8 950 aa22.75■■□□□ 1.23
SMC4-221ENST00000489573 NLRC5Q86WI3 1866 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 HHLA1C9JL84 531 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 TBC1D4O60343 1298 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 GPD1P21695 349 aa22.74■■□□□ 1.23
SMC4-221ENST00000489573 MARCKSL1P49006 195 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms