RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.34□□□□□ -1.076e-17■■■■□ 26.3
SSR1-210ENST00000489567 EPS15L1Q9UBC2 864 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 APEX2Q9UBZ4 518 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 LIMA1Q9UHB6 759 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 CDH7Q9ULB5 785 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 NR2E1Q9Y466 385 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 PCDHB4Q9Y5E5 795 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 LRRC10BA6NIK2 292 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 BECN2A8MW95 431 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 AP1G2O75843 785 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 NOL4O94818 638 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 F11P03951 625 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 PNMA6AP0CW24 399 aaPredicted RBP8.33□□□□□ -1.08
SSR1-210ENST00000489567 ZNF132P52740 706 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 MAP3K7CLP57077 242 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 CYP4F8P98187 520 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 PTPN21Q16825 1174 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 CYP4A22Q5TCH4 519 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 PARM1Q6UWI2 310 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 CLEC20AQ6ZU45 233 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 GPRIN1Q7Z2K8 1008 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 ITIH5Q86UX2 942 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 GPIHBP1Q8IV16 184 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 ZDHHC14Q8IZN3 488 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 SCAMP5Q8TAC9 235 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 ACSF2Q96CM8 615 aaPredicted RBP8.33□□□□□ -1.08
SSR1-210ENST00000489567 SPATA17Q96L03 361 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 MYRFLQ96LU7 910 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 CSNK1G1Q9HCP0 422 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 RYDENQ9NUL5 291 aaKnown RBP8.33□□□□□ -1.08
SSR1-210ENST00000489567 MUTYHQ9UIF7 546 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 CNTN6Q9UQ52 1028 aa8.33□□□□□ -1.08
SSR1-210ENST00000489567 HHLA1C9JL84 531 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TULP2O00295 520 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 NCANO14594 1321 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 ZNF197O14709 1029 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TNFRSF10BO14763 440 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TRIM66O15016 1216 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 EPHB6O15197 1021 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 CSH1P0DML2 217 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 CSH2P0DML3 217 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 PGFP49763 221 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 YWHAEP62258 255 aaKnown RBP8.32□□□□□ -1.08
SSR1-210ENST00000489567 TAF12Q16514 161 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 ARHGAP44Q17R89 818 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 KLHDC7AQ5VTJ3 777 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 ARHGAP17Q68EM7 881 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 DENND5BQ6ZUT9 1274 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TTC30AQ86WT1 665 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TTC39CQ8N584 583 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 LEMD2Q8NC56 503 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 RBBP8NLQ8NC74 664 aaPredicted RBP8.32□□□□□ -1.08
SSR1-210ENST00000489567 FGF14Q92915 247 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 JAKMIP2Q96AA8 810 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TRMT2BQ96GJ1 504 aaKnown RBP8.32□□□□□ -1.08
SSR1-210ENST00000489567 DCBLD2Q96PD2 775 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 LSM14BQ9BX40 385 aaKnown RBP8.32□□□□□ -1.08
SSR1-210ENST00000489567 GPR88Q9GZN0 384 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 ATXN3LQ9H3M9 355 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 FAM124BQ9H5Z6 455 aaPredicted RBP8.32□□□□□ -1.08
SSR1-210ENST00000489567 KCNK12Q9HB15 430 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 DMAP1Q9NPF5 467 aaPredicted RBP8.32□□□□□ -1.08
SSR1-210ENST00000489567 DNAJC12Q9UKB3 198 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 SIK3Q9Y2K2 1263 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 FHOD1Q9Y613 1164 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 GREB1Q4ZG55 1949 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 ATP8B3O60423 1300 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 SMTNL1A8MU46 457 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 LGALS16A8MUM7 142 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 ANHXE9PGG2 379 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 O00370 1275 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TEX33O43247 280 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 MICAL2O94851 1124 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 FAM200BP0CF97 657 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 KRT5P13647 590 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 CD19P15391 556 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 FCARP24071 287 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 ANXA13P27216 316 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 SLC5A3P53794 718 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 IFRD2Q12894 506 aaPredicted RBP8.32□□□□□ -1.08
SSR1-210ENST00000489567 HTR4Q13639 388 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 GOLGA7BQ2TAP0 167 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 FAM78AQ5JUQ0 283 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TXNDC8Q6A555 127 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 SHC3Q92529 594 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 ASB16Q96NS5 453 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 SLC22A12Q96S37 553 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 KXD1Q9BQD3 176 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TTLL2Q9BWV7 592 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 NAA15Q9BXJ9 866 aaKnown RBP8.32□□□□□ -1.08
SSR1-210ENST00000489567 SLC46A2Q9BY10 475 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 DUSP16Q9BY84 665 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 PLA2G2FQ9BZM2 168 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 GANQ9H2C0 597 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 GDE1Q9NZC3 331 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TSPAN16Q9UKR8 245 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 NUMBLQ9Y6R0 609 aa8.32□□□□□ -1.08
SSR1-210ENST00000489567 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
SSR1-210ENST00000489567 FOXN3O00409 490 aaPredicted RBP8.31□□□□□ -1.08
SSR1-210ENST00000489567 STK25O00506 426 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms