RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 KLHL10Q6JEL2 608 aa25.5■■□□□ 1.67
PTPN18-213ENST00000489215 TPRG1Q6ZUI0 275 aa25.5■■□□□ 1.67
PTPN18-213ENST00000489215 NUP93Q8N1F7 819 aa25.5■■□□□ 1.67
PTPN18-213ENST00000489215 DTWD2Q8NBA8 298 aa25.5■■□□□ 1.67
PTPN18-213ENST00000489215 NELFBQ8WX92 580 aa25.5■■□□□ 1.67
PTPN18-213ENST00000489215 ZNF518BQ9C0D4 1074 aa25.5■■□□□ 1.67
PTPN18-213ENST00000489215 C8orf33Q9H7E9 229 aaPredicted RBP25.5■■□□□ 1.67
PTPN18-213ENST00000489215 DMAP1Q9NPF5 467 aaPredicted RBP25.5■■□□□ 1.67
PTPN18-213ENST00000489215 COQ4Q9Y3A0 265 aa25.5■■□□□ 1.67
PTPN18-213ENST00000489215 BIN1O00499 593 aa25.49■■□□□ 1.67
PTPN18-213ENST00000489215 CD44P16070 742 aaKnown RBP25.49■■□□□ 1.67
PTPN18-213ENST00000489215 PAK1Q13153 545 aa25.49■■□□□ 1.67
PTPN18-213ENST00000489215 CCDC40Q4G0X9 1142 aa25.49■■□□□ 1.67
PTPN18-213ENST00000489215 TTI2Q6NXR4 508 aa25.49■■□□□ 1.67
PTPN18-213ENST00000489215 FAM35AQ86V20 835 aa25.49■■□□□ 1.67
PTPN18-213ENST00000489215 PDZD8Q8NEN9 1154 aa25.49■■□□□ 1.67
PTPN18-213ENST00000489215 APOBEC3GQ9HC16 384 aaKnown RBP25.49■■□□□ 1.67
PTPN18-213ENST00000489215 MUC6Q6W4X9 2439 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 FAM170BA6NMN3 283 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 BMP6P22004 513 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 NHLH1Q02575 133 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 TCF15Q12870 199 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 UBXN2BQ14CS0 331 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 CC2D1AQ6P1N0 951 aaPredicted RBP25.48■■□□□ 1.67
PTPN18-213ENST00000489215 STKLD1Q8NE28 680 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 OVCA2Q8WZ82 227 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 LTB4R2Q9NPC1 389 aa25.48■■□□□ 1.67
PTPN18-213ENST00000489215 MIA3Q5JRA6 1907 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 CLDN5O00501 218 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 PMM2O15305 246 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 CILPO75339 1184 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 PRAMEF12O95522 483 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 CKMP06732 381 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 YWHAQP27348 245 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 YWHAEP62258 255 aaKnown RBP25.47■■□□□ 1.67
PTPN18-213ENST00000489215 FUKQ8N0W3 1084 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 SLC35C1Q96A29 364 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 ELMO3Q96BJ8 720 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 RSPRY1Q96DX4 576 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 TRPC7Q9HCX4 862 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 PIAS3Q9Y6X2 628 aa25.47■■□□□ 1.67
PTPN18-213ENST00000489215 ARNTLO00327 626 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 P4HA2O15460 535 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 TADA3O75528 432 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 AP1G2O75843 785 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 HDCP19113 662 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 KPNA1P52294 538 aaPredicted RBP25.46■■□□□ 1.67
PTPN18-213ENST00000489215 CAMK4Q16566 473 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 SEMA4DQ92854 862 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 USP13Q92995 863 aaPredicted RBP25.46■■□□□ 1.67
PTPN18-213ENST00000489215 CYFIP2Q96F07 1278 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 HNRNPABQ99729 332 aaKnown RBP25.46■■□□□ 1.67
PTPN18-213ENST00000489215 DUSP9Q99956 384 aaKnown RBP25.46■■□□□ 1.67
PTPN18-213ENST00000489215 FOXQ1Q9C009 403 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 CSNK1G1Q9HCP0 422 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 CTNND2Q9UQB3 1225 aa25.46■■□□□ 1.67
PTPN18-213ENST00000489215 TICRRQ7Z2Z1 1910 aa25.45■■□□□ 1.67
PTPN18-213ENST00000489215 ANAPC1Q9H1A4 1944 aa25.45■■□□□ 1.67
PTPN18-213ENST00000489215 DCNP07585 359 aaKnown RBP25.45■■□□□ 1.66
PTPN18-213ENST00000489215 TCF3P15923 654 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 RPS9P46781 194 aaKnown RBP25.45■■□□□ 1.66
PTPN18-213ENST00000489215 AMPD2Q01433 879 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 CBWD6Q4V339 395 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 CBWD3Q5JTY5 395 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 CBWD5Q5RIA9 395 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 PAQR9Q6ZVX9 377 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 RALGPS2Q86X27 583 aaPredicted RBP25.45■■□□□ 1.66
PTPN18-213ENST00000489215 GPIHBP1Q8IV16 184 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 KIAA1958Q8N8K9 716 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 SLC2A14Q8TDB8 520 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 FAM3CQ92520 227 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 GBP4Q96PP9 640 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 FBXO44Q9H4M3 255 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.45■■□□□ 1.663e-6■■■■■ 81.7
PTPN18-213ENST00000489215 DLGAP2Q9P1A6 1054 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 MYH10P35580 1976 aa25.45■■□□□ 1.66
PTPN18-213ENST00000489215 NCANO14594 1321 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 FAM200BP0CF97 657 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 CCDC192P0DO97 292 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 CD58P19256 250 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 TBXAS1P24557 533 aaPredicted RBP25.44■■□□□ 1.66
PTPN18-213ENST00000489215 FMO5P49326 533 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 USP46P62068 366 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 TAF10Q12962 218 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 MLKLQ8NB16 471 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 ATOH1Q92858 354 aaPredicted RBP25.44■■□□□ 1.66
PTPN18-213ENST00000489215 LRRC3BQ96PB8 259 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 KCNK16Q96T55 309 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 IER2Q9BTL4 223 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 PNPLA8Q9NP80 782 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 KRT82Q9NSB4 513 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 GCNT4Q9P109 453 aa25.44■■□□□ 1.66
PTPN18-213ENST00000489215 ZNF840PA6NDX5 716 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 CACNA2D1P54289 1103 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 MARSP56192 900 aaKnown RBP25.43■■□□□ 1.66
PTPN18-213ENST00000489215 PDGFRLQ15198 375 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 ITPRIPL2Q3MIP1 535 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 ARL14EPQ8N8R7 260 aaPredicted RBP25.43■■□□□ 1.66
PTPN18-213ENST00000489215 C12orf29Q8N999 325 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 FBXO32Q969P5 355 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms