RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 E9PBE3 544 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 KLHL41O60662 606 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 FAM200BP0CF97 657 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 P3H2Q8IVL5 708 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 RAB42Q8N4Z0 105 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 DIS3LQ8TF46 1054 aaKnown RBP18.25■□□□□ 0.51
NPHP4-209ENST00000489180 BHMTQ93088 406 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 APOL2Q9BQE5 337 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 SEMA4AQ9H3S1 761 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 DDIT4Q9NX09 232 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 DDX20Q9UHI6 824 aaKnown RBP18.25■□□□□ 0.51
NPHP4-209ENST00000489180 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
NPHP4-209ENST00000489180 PGK2P07205 417 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 LAMB3Q13751 1172 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 CCDC142Q17RM4 750 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 HDAC7Q8WUI4 952 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 CHST12Q9NRB3 414 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 PNMA8BQ9ULN7 279 aaPredicted RBP18.25■□□□□ 0.51
NPHP4-209ENST00000489180 NFIBO00712 420 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 PSMA4P25789 261 aaKnown RBP18.24■□□□□ 0.51
NPHP4-209ENST00000489180 RGS4P49798 205 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 C10orf120Q5SQS8 335 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 UNKQ9C0B0 810 aaKnown RBP18.24■□□□□ 0.51
NPHP4-209ENST00000489180 CPS1P31327 1500 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 ADGRB3O60242 1522 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 TAL1P17542 331 aaPredicted RBP18.24■□□□□ 0.51
NPHP4-209ENST00000489180 TMED10P49755 219 aaKnown RBP18.24■□□□□ 0.51
NPHP4-209ENST00000489180 EN1Q05925 392 aaPredicted RBP18.24■□□□□ 0.51
NPHP4-209ENST00000489180 ARHGEF7Q14155 803 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 SPOCD1Q6ZMY3 1216 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 MTMR8Q96EF0 704 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 WDCPQ9H6R7 721 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 ERAP1Q9NZ08 941 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 TSC22D4Q9Y3Q8 395 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 ATP6V1G2O95670 118 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 ZNF23P17027 643 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 CDC42EP1Q00587 391 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 RUNX1T1Q06455 604 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 RASA2Q15283 850 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 CLEC16AQ2KHT3 1053 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 BTN2A2Q8WVV5 523 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 SMAD5Q99717 465 aaKnown RBP18.24■□□□□ 0.51
NPHP4-209ENST00000489180 LSM7Q9UK45 103 aaKnown RBP18.24■□□□□ 0.51
NPHP4-209ENST00000489180 FAM153BP0C7A2 387 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 OR1G1P47890 313 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 FAM153CQ494X1 144 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 EMC1Q8N766 993 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 PLEKHA8Q96JA3 519 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 FAM153AQ9UHL3 310 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 PAIP2BQ9ULR5 123 aaKnown RBP18.24■□□□□ 0.51
NPHP4-209ENST00000489180 CYTH3O43739 400 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 NPTX2P47972 431 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 C11orf96Q7Z7L8 435 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 ZSWIM2Q8NEG5 633 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 TAS1R2Q8TE23 839 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 FAM172AQ8WUF8 416 aa18.24■□□□□ 0.51
NPHP4-209ENST00000489180 TBL3Q12788 808 aaKnown RBP18.23■□□□□ 0.51
NPHP4-209ENST00000489180 STX5Q13190 355 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 LINC00523Q86TU6 105 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 CAVIN3Q969G5 261 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 HBP1O60381 514 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 SERPINB8P50452 374 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 ACER1Q8TDN7 264 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 THRAP10827 490 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 CYP2B6P20813 491 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 MZF1P28698 734 aaPredicted RBP18.23■□□□□ 0.51
NPHP4-209ENST00000489180 PCSK1P29120 753 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 TAF6P49848 677 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 RPL10AP62906 217 aaKnown RBP18.23■□□□□ 0.51
NPHP4-209ENST00000489180 FIGNQ5HY92 759 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 PLEKHM3Q6ZWE6 761 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 KAZALD1Q96I82 304 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 SOX10P56693 466 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 SKOR1P84550 965 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 ADGRA1Q86SQ6 560 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 BBS2Q9BXC9 721 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 RNF112Q9ULX5 631 aa18.23■□□□□ 0.51
NPHP4-209ENST00000489180 SDR42E2A6NKP2 422 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 DDX5P17844 614 aaKnown RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 FAM117BQ6P1L5 589 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 IZUMO2Q6UXV1 221 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 GPR141Q7Z602 305 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 RBM46Q8TBY0 533 aaKnown RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 RBBP8Q99708 897 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 FRMD8Q9BZ67 464 aaPredicted RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 WWOXQ9NZC7 414 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 TAGLN3Q9UI15 199 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 EVPLLA8MZ36 301 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 HSPA13P48723 471 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 KPNB1Q14974 876 aaKnown RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 AGAP9Q5VTM2 703 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 BNC2Q6ZN30 1099 aaPredicted RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 HIC2Q96JB3 615 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 ABI2Q9NYB9 513 aaPredicted RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 USE1Q9NZ43 259 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 NAALADL1Q9UQQ1 740 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 MAFGO15525 162 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 SOAT2O75908 522 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms