RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 THNSL1Q8IYQ7 743 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 C19orf47Q8N9M1 422 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 COLGALT1Q8NBJ5 622 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 PPM1EQ8WY54 764 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 ZNF558Q96NG5 402 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 FAM193BQ96PV7 902 aaPredicted RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 CDADC1Q9BWV3 514 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 SRRTQ9BXP5 876 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 CCSER1Q9C0I3 900 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 RSAD1Q9HA92 442 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 CFAP45Q9UL16 551 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 ODF2LQ9ULJ1 636 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 STRIP2Q9ULQ0 834 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 MTMR6Q9Y217 621 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 FAM50BQ9Y247 325 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 SF3B6Q9Y3B4 125 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 PCDHB2Q9Y5E7 798 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 ATP6V1DQ9Y5K8 247 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 MRPL42Q9Y6G3 142 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 A0A1B0GUA9 196 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 TMEM82A0PJX8 343 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 TCAF2A6NFQ2 919 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 EPOPA6NHQ4 379 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 E9PMD0 336 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 RBAK-RBAKDNI3L0D1 243 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 K7ERI5 159 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 ACKR2O00590 384 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 LPXNO60711 386 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 TBCAO75347 108 aaKnown RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 CSDE1O75534 798 aaKnown RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 ZNF205O95201 554 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 YEATS4O95619 227 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 SSBP05455 408 aaKnown RBP eCLIP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 PLA2G4BP0C869 781 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 ARF4P18085 180 aaPredicted RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 ARL4AP40617 200 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 MRPS5P82675 430 aaKnown RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 STRN3Q13033 797 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 GIT2Q14161 759 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 STK38Q15208 465 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 DCAF4L1Q3SXM0 396 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 TMEM119Q4V9L6 283 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 NOMO2Q5JPE7 1267 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 RINT1Q6NUQ1 792 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 CCDC81Q6ZN84 652 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 CCDC73Q6ZRK6 1079 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 MAEAQ7L5Y9 396 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 NAT16Q8N8M0 369 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 SYT2Q8N9I0 419 aaPredicted RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 ZSCAN18Q8TBC5 510 aaPredicted RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 KCNG4Q8TDN1 519 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 POF1BQ8WVV4 589 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 LARP4BQ92615 738 aaKnown RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 TMEM169Q96HH4 297 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 SEC16BQ96JE7 1060 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 CASD1Q96PB1 797 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 RPS6KC1Q96S38 1066 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 CDCA3Q99618 268 aaPredicted RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 PYM1Q9BRP8 204 aaKnown RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 G6PC3Q9BUM1 346 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 LRRC27Q9C0I9 530 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 GBP3Q9H0R5 595 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 CSRNP2Q9H175 543 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 MINDY3Q9H8M7 445 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 SP110Q9HB58 689 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 CRTAC1Q9NQ79 661 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 GPRC5CQ9NQ84 441 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 KMT5AQ9NQR1 393 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 TLR9Q9NR96 1032 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 TYW1Q9NV66 732 aaKnown RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 SSX2IPQ9Y2D8 614 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 INPP5FQ9Y2H2 1132 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 GIT1Q9Y2X7 761 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 SRPRBQ9Y5M8 271 aaKnown RBP5.6□□□□□ -1.51
SF3A3-207ENST00000488934 COL6A3P12111 3177 aa5.6□□□□□ -1.51
SF3A3-207ENST00000488934 OR14I1A6ND48 311 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 CCDC169A6NNP5 214 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 PP2D1A8MPX8 630 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 RFXAPO00287 272 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 GRM6O15303 877 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 INPPL1O15357 1258 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 HIP1RO75146 1068 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 ZC3H11AO75152 810 aaKnown RBP eCLIP5.59□□□□□ -1.51
SF3A3-207ENST00000488934 PPP6R2O75170 966 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 SEMA7AO75326 666 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 FGF18O76093 207 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 ITGB1P05556 798 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 PRKCBP05771 671 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 KRT18P05783 430 aaKnown RBP5.59□□□□□ -1.51
SF3A3-207ENST00000488934 LINC00271P0C7V0 271 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 ZSCAN22P10073 491 aaPredicted RBP5.59□□□□□ -1.51
SF3A3-207ENST00000488934 PLS3P13797 630 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 VAV1P15498 845 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 ATF7P17544 494 aaPredicted RBP5.59□□□□□ -1.51
SF3A3-207ENST00000488934 CDC25AP30304 524 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 HOXA11P31270 313 aaPredicted RBP5.59□□□□□ -1.51
SF3A3-207ENST00000488934 STAT6P42226 847 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 NPTX2P47972 431 aa5.59□□□□□ -1.51
SF3A3-207ENST00000488934 NASPP49321 788 aaPredicted RBP5.59□□□□□ -1.51
SF3A3-207ENST00000488934 SLC12A3P55017 1021 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms