RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 CCL26Q9Y258 94 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 NME7Q9Y5B8 376 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 R4GN57 208 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 F8VP50 259 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 KINO60870 393 aaKnown RBP14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 AKAP3O75969 853 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 SMC2O95347 1197 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 ASS1P00966 412 aaKnown RBP14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 LMNAP02545 664 aaKnown RBP14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 SOX9P48436 509 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 CCR3P51677 355 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 CDH8P55286 799 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 CSTF1Q05048 431 aaKnown RBP14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 USP4Q13107 963 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 MTAPQ13126 283 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 ADAM9Q13443 819 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 PNOCQ13519 176 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 PDGFRLQ15198 375 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 ZCWPW2Q504Y3 356 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 DGKKQ5KSL6 1271 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 MAMSTRQ6ZN01 415 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 EXOC4Q96A65 974 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 SMARCD1Q96GM5 515 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 SLITRK1Q96PX8 696 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 GSDMAQ96QA5 445 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 FAM126AQ9BYI3 521 aaPredicted RBP14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 DNAI2Q9GZS0 605 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 GKN1Q9NS71 199 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 PCDHGA2Q9Y5H1 932 aa14.69□□□□□ -0.06
SPTLC1-207ENST00000488921 RTN3O95197 1032 aaPredicted RBP14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 HLA-DRAP01903 254 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 EPB41P11171 864 aaKnown RBP14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 CHRNB1P11230 501 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 TCF3P15923 654 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 RAP1GAPP47736 663 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 NRLP54845 237 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 TNK2Q07912 1038 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 RUNX3Q13761 415 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 MTF1Q14872 753 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 ZNF77Q15935 545 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 COBLL1Q53SF7 1204 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 FAM35AQ86V20 835 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 UNC93AQ86WB7 457 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 SYNPOQ8N3V7 929 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 PDZD8Q8NEN9 1154 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 SMARCE1Q969G3 411 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 TIGD1Q96MW7 591 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 TSG101Q99816 390 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 FAM83CQ9BQN1 747 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 MED10Q9BTT4 135 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 B3GNT5Q9BYG0 378 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 ZNF518BQ9C0D4 1074 aa14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 DMAP1Q9NPF5 467 aaPredicted RBP14.68□□□□□ -0.06
SPTLC1-207ENST00000488921 CETN3O15182 167 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 STX10O60499 249 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 TRIM49P0CI25 452 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 TRIM49CP0CI26 452 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 HDCP19113 662 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 GTF2H1P32780 548 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 GCLMP48507 274 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 IFNAR2P48551 515 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 USP46P62068 366 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 PON2Q15165 354 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 C1orf220Q5T0J3 134 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 ZNF658Q5TYW1 1059 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 SMYD4Q8IYR2 804 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 NUP93Q8N1F7 819 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 CPA6Q8N4T0 437 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 ARL14EPQ8N8R7 260 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 ENGASEQ8NFI3 743 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 TTC8Q8TAM2 541 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 OSCP1Q8WVF1 389 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 ATRIPQ8WXE1 791 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 OVCA2Q8WZ82 227 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 ATP2A3Q93084 1043 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 SDCBP2Q9H190 292 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 EBF3Q9H4W6 596 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 TMEM8AQ9HCN3 771 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 HPS4Q9NQG7 708 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 ZSCAN32Q9NX65 697 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 GCNT4Q9P109 453 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 ARHGAP26Q9UNA1 814 aa14.67□□□□□ -0.06
SPTLC1-207ENST00000488921 KIAA1549LQ6ZVL6 1849 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 C2orf78A6NCI8 922 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 CLDN5O00501 218 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 YWHAQP27348 245 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 ASPAP45381 313 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 CACNA2D1P54289 1103 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 STIM1Q13586 685 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 KRT39Q6A163 491 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 TRIM68Q6AZZ1 485 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 TXNDC11Q6PKC3 985 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 ACOT1Q86TX2 421 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 ADSSL1Q8N142 457 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 SPEM1Q8N4L4 309 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 KIAA1958Q8N8K9 716 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 ZBTB44Q8NCP5 570 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 TTC16Q8NEE8 873 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 SH3RF2Q8TEC5 729 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 NELL1Q92832 810 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms