RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CCINQ13939 588 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 KCNB1Q14721 858 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 PPP2R5DQ14738 602 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 MTF1Q14872 753 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 PDGFRLQ15198 375 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 SGSM1Q2NKQ1 1148 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 C1orf220Q5T0J3 134 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 SV2AQ7L0J3 742 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 KIAA2013Q8IYS2 634 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 SH3RF2Q8TEC5 729 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 RUBCNQ92622 972 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 CEP295NLQ96MC4 621 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 FAM126AQ9BYI3 521 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 VRTNQ9H8Y1 702 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.371e-6■■■■■ 38.5
CCHCR1-215ENST00000488920 C2orf42Q9NWW7 574 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 TRPM5Q9NZQ8 1165 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 TRAF3IP3Q9Y228 551 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 WNT6Q9Y6F9 365 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 COL4A2P08572 1712 aa12.71□□□□□ -0.38
CCHCR1-215ENST00000488920 MIA3Q5JRA6 1907 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 TICRRQ7Z2Z1 1910 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 ZNF840PA6NDX5 716 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 KIF20AO95235 890 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 HOXC13P31276 330 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 VAMP7P51809 220 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 NOP14P78316 857 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 DMWDQ09019 674 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 GRSF1Q12849 480 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 IFRD2Q12894 506 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 TAF10Q12962 218 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 ORC1Q13415 861 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 ZNF77Q15935 545 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 ZACNQ401N2 412 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 NAIF1Q69YI7 327 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 SPOPLQ6IQ16 392 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 FSTL4Q6MZW2 842 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 ACOT1Q86TX2 421 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 OSCP1Q8WVF1 389 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 CHFRQ96EP1 664 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 KCNK16Q96T55 309 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 TTLL2Q9BWV7 592 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 ELOVL4Q9GZR5 314 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 RNF38Q9H0F5 515 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 LINC00597Q9H2U6 94 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 FBRSL1Q9HCM7 1045 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 EHD2Q9NZN4 543 aa12.7□□□□□ -0.38
CCHCR1-215ENST00000488920 FAM186AA6NE01 2351 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 CHURC1-FNTBB4DL54 471 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 TRDMT1O14717 391 aaKnown RBP12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 IKBKBO14920 756 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 AKAP3O75969 853 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 HLA-DRAP01903 254 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 P4HA1P13674 534 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 NR2F2P24468 414 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 IFNAR2P48551 515 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 FNTBP49356 437 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 GALK1P51570 392 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 ZXDBP98169 803 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 ADAM9Q13443 819 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 TMEM196Q5HYL7 178 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 HEATR6Q6AI08 1181 aaKnown RBP12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 PAQR9Q6ZVX9 377 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 SYNPOQ8N3V7 929 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 CPA6Q8N4T0 437 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 TNIP3Q96KP6 325 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 ECT2Q9H8V3 914 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 NCDNQ9UBB6 729 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 SMG5Q9UPR3 1016 aaKnown RBP12.69□□□□□ -0.38
CCHCR1-215ENST00000488920 EP300Q09472 2414 aaPredicted RBP12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 K7ESF4 209 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 LEFTY2O00292 366 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 EGFP01133 1207 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 YWHAQP27348 245 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 GJA4P35212 333 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 PPP3CCP48454 512 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 GCLMP48507 274 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 PDE6CP51160 858 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 NDST1P52848 882 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 AMPD2Q01433 879 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 PPP3CAQ08209 521 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 USP4Q13107 963 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 PNOCQ13519 176 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 BECN1Q14457 450 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 LPAL2Q16609 132 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 NFIL3Q16649 462 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 EML3Q32P44 896 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 PKN3Q6P5Z2 889 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 FAM35AQ86V20 835 aa12.68□□□□□ -0.38
CCHCR1-215ENST00000488920 FAM186BQ8IYM0 893 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms