RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PTPRHQ9HD43 1115 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 CHST7Q9NS84 486 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 SNTG2Q9NY99 539 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 HCSTQ9UBK5 93 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 PRUNE2Q8WUY3 3088 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 MGRN1O60291 552 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 IVDP26440 423 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 BPIFB4P59827 614 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 CENPCQ03188 943 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
COL16A1-215ENST00000488897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-215ENST00000488897 GPR182O15218 404 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 SNX3O60493 162 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 TCEA3O75764 348 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 ATF2P15336 505 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 PTP4A2Q12974 167 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 PREPLQ4J6C6 727 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-215ENST00000488897 C9orf50Q5SZB4 431 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 BBOF1Q8ND07 529 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 ZFP42Q96MM3 310 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 MSTO1Q9BUK6 570 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 C1orf112Q9NSG2 853 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.26■□□□□ 0.67
COL16A1-215ENST00000488897 TPX2Q9ULW0 747 aaKnown RBP19.26■□□□□ 0.67
COL16A1-215ENST00000488897 PCDHB2Q9Y5E7 798 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 CNTNAP2Q9UHC6 1331 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 FGFR1P11362 822 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 GARTP22102 1010 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 CHKAP35790 457 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 ITGA8P53708 1063 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 DEFB103AP81534 67 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 LLGL1Q15334 1064 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 GLRA4Q5JXX5 417 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 CRELD2Q6UXH1 353 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-215ENST00000488897 PLCD3Q8N3E9 789 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 SMG8Q8ND04 991 aaKnown RBP19.26■□□□□ 0.67
COL16A1-215ENST00000488897 GEMIN8Q9NWZ8 242 aaKnown RBP19.26■□□□□ 0.67
COL16A1-215ENST00000488897 ANAPC5Q9UJX4 755 aa19.26■□□□□ 0.67
COL16A1-215ENST00000488897 TMEM120BA0PK00 339 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 CFAP73A6NFT4 308 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 POU5F1BQ06416 359 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 WLSQ5T9L3 541 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 CCDC63Q8NA47 563 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 MYCBPQ99417 103 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-215ENST00000488897 TRIM6Q9C030 488 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-215ENST00000488897 ZBBXA8MT70 800 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 ENPP3O14638 875 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 THAP12O43422 761 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 TOM1L1O75674 476 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 SLC8A1P32418 973 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 ADCY8P40145 1251 aa19.25■□□□□ 0.67
COL16A1-215ENST00000488897 ELF3P78545 371 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-215ENST00000488897 DDX27Q96GQ7 796 aaKnown RBP19.25■□□□□ 0.67
COL16A1-215ENST00000488897 USP15Q9Y4E8 981 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-215ENST00000488897 CXCL8P10145 99 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 RRM1P23921 792 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 IGFBP6P24592 240 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-215ENST00000488897 MAGEA10P43363 369 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-215ENST00000488897 NSFP46459 744 aaKnown RBP19.24■□□□□ 0.67
COL16A1-215ENST00000488897 TMEM199Q8N511 208 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 ATG4AQ8WYN0 398 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 AGO2Q9UKV8 859 aaKnown RBP19.24■□□□□ 0.67
COL16A1-215ENST00000488897 IPPQ9Y573 584 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 SUN1O94901 812 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 PROSCO94903 275 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 OAS1P00973 400 aaKnown RBP19.24■□□□□ 0.67
COL16A1-215ENST00000488897 ATF7P17544 494 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-215ENST00000488897 PROZP22891 400 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 KYNUQ16719 465 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 FAM187BQ17R55 369 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 WDR44Q5JSH3 913 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 HIBCHQ6NVY1 386 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-215ENST00000488897 NOTUMQ6P988 496 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 MPZL3Q6UWV2 235 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 VSTM1Q6UX27 236 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 PLCD4Q9BRC7 762 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 PI4K2AQ9BTU6 479 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 SEZ6LQ9BYH1 1024 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 TNFSF13BQ9Y275 285 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 TRIP11Q15643 1979 aa19.24■□□□□ 0.67
COL16A1-215ENST00000488897 A0A0B4J269 797 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 TCP11X1B4DZS4 312 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 FAM189A1O60320 539 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 ABCD1P33897 745 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 CDC42EP1Q00587 391 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 LIN9Q5TKA1 542 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 FAM109BQ6ICB4 259 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-215ENST00000488897 CCDC89Q8N998 374 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 MGARPQ8TDB4 240 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 CPA5Q8WXQ8 436 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 CCDC77Q9BR77 488 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 KIAA1586Q9HCI6 787 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 KCNK9Q9NPC2 374 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 FAM105AQ9NUU6 356 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 TANC1Q9C0D5 1861 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 GRXCR1A8MXD5 290 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 PSTPIP1O43586 416 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 CYP1A1P04798 512 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-215ENST00000488897 STAG3L1P0CL83 205 aa19.23■□□□□ 0.67
COL16A1-215ENST00000488897 FPGSQ05932 587 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms