RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PNPLA8Q9NP80 782 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 NLRC4Q9NPP4 1024 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 A1CFQ9NQ94 594 aaKnown RBP3.95□□□□□ -1.78
CD46-215ENST00000488596 HESX1Q9UBX0 185 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 TAGLN3Q9UI15 199 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 ITGB1BP2Q9UKP3 347 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 ENTPD2Q9Y5L3 495 aa3.95□□□□□ -1.78
CD46-215ENST00000488596 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 MANSC4A6NHS7 340 aaPredicted RBP3.94□□□□□ -1.78
CD46-215ENST00000488596 RASA4BC9J798 803 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 hCG_1984214I3L0E3 225 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 RASA4O43374 803 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 RASSF9O75901 435 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 LDHAP00338 332 aaKnown RBP3.94□□□□□ -1.78
CD46-215ENST00000488596 MT-ND5P03915 603 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 CELA2AP08217 269 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 TSHRP16473 764 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 GCLCP48506 637 aaPredicted RBP3.94□□□□□ -1.78
CD46-215ENST00000488596 LILRA4P59901 499 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 TCF15Q12870 199 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 DYRK1AQ13627 763 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 IQCB1Q15051 598 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 SLC44A4Q53GD3 710 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 C10orf62Q5T681 223 aaPredicted RBP3.94□□□□□ -1.78
CD46-215ENST00000488596 KAZNQ674X7 775 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 VWA1Q6PCB0 445 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 TMEM108Q6UXF1 575 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 TSHZ1Q6ZSZ6 1077 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 TOGARAM2Q6ZUX3 1019 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 GRASPQ7Z6J2 395 aaPredicted RBP3.94□□□□□ -1.78
CD46-215ENST00000488596 PEG10Q86TG7 708 aaKnown RBP3.94□□□□□ -1.78
CD46-215ENST00000488596 DPP9Q86TI2 863 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 SPICE1Q8N0Z3 855 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.94□□□□□ -1.78
CD46-215ENST00000488596 ZNF366Q8N895 744 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 RNF152Q8N8N0 203 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 ATP11CQ8NB49 1132 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 ACRBPQ8NEB7 543 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 VPS37AQ8NEZ2 397 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 TFAP2BQ92481 460 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 KIAA1191Q96A73 305 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 TMEM125Q96AQ2 219 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 SARAFQ96BY9 339 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 MSLNLQ96KJ4 702 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 SNX22Q96L94 193 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 SGCZQ96LD1 299 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 MED15Q96RN5 788 aa3.94□□□□□ -1.78
CD46-215ENST00000488596 ZNF70Q9UC06 446 aaPredicted RBP3.94□□□□□ -1.78
CD46-215ENST00000488596 MRPS17Q9Y2R5 130 aaKnown RBP3.94□□□□□ -1.78
CD46-215ENST00000488596 PRAMEF33A0A0G2JMD5 474 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 F5H697 171 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 APOL1O14791 398 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 MPPED1O15442 326 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 PRAMEF10O60809 474 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 HARSP12081 509 aaKnown RBP3.93□□□□□ -1.78
CD46-215ENST00000488596 IL1R1P14778 569 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 WT1P19544 449 aaPredicted RBP3.93□□□□□ -1.78
CD46-215ENST00000488596 ABCB4P21439 1286 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 GRIA3P42263 894 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 HTR3AP46098 478 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 ANXA11P50995 505 aaKnown RBP3.93□□□□□ -1.78
CD46-215ENST00000488596 MAPK7Q13164 816 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 MORC3Q14149 939 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 ZIK1Q3SY52 487 aaPredicted RBP3.93□□□□□ -1.78
CD46-215ENST00000488596 PLA1AQ53H76 456 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 TSTD2Q5T7W7 516 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 C1orf228Q6PIY5 440 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 PTF1AQ7RTS3 328 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 TMPRSS9Q7Z410 1059 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 CLNKQ7Z7G1 428 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 OR2C3Q8N628 320 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 SPSB4Q96A44 273 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 MESP1Q9BRJ9 268 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 CERS4Q9HA82 394 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 STARD7Q9NQZ5 370 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 MID2Q9UJV3 735 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 HDAC9Q9UKV0 1011 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 PCDHGB2Q9Y5G2 931 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 AOX1Q06278 1338 aa3.93□□□□□ -1.78
CD46-215ENST00000488596 A0A1W2PS29 197 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 MBD3L4A6NDZ8 208 aaPredicted RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 MBD3L3A6NE82 208 aaPredicted RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 H7C4K7 107 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 RAB27BO00194 218 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 FOXN3O00409 490 aaPredicted RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 PROM1O43490 865 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 ANXA2P07355 339 aaKnown RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 SRGNP10124 158 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 TXNP10599 105 aaKnown RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 BTF3P20290 206 aaKnown RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 GPD1P21695 349 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 FGFR2P21802 821 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 ITPKBP27987 946 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 NPTX2P47972 431 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 PXNP49023 591 aaPredicted RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 CARSP49589 748 aaKnown RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 NDUFV1P49821 464 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 ITGA8P53708 1063 aa3.92□□□□□ -1.78
CD46-215ENST00000488596 RPS7P62081 194 aaKnown RBP3.92□□□□□ -1.78
CD46-215ENST00000488596 PMS2P11Q13670 270 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms