RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SCARA3Q6AZY7 606 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 CYP2U1Q7Z449 544 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 NOC3LQ8WTT2 800 aaKnown RBP20.36■□□□□ 0.85
GGPS1-206ENST00000488594 KBTBD7Q8WVZ9 684 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 TTLL2Q9BWV7 592 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 TPSD1Q9BZJ3 242 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 INVSQ9Y283 1065 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 TRIM66O15016 1216 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 ATP2C2O75185 946 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 CEACAM1P13688 526 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 CSRP1P21291 193 aaKnown RBP20.35■□□□□ 0.85
GGPS1-206ENST00000488594 BDNFP23560 247 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 SEC13P55735 322 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 PSMC1P62191 440 aaKnown RBP20.35■□□□□ 0.85
GGPS1-206ENST00000488594 NOP14P78316 857 aaKnown RBP20.35■□□□□ 0.85
GGPS1-206ENST00000488594 SLC7A9P82251 487 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 DUOXA2Q1HG44 320 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 HSF5Q4G112 596 aaPredicted RBP20.35■□□□□ 0.85
GGPS1-206ENST00000488594 SH3PXD2AQ5TCZ1 1133 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 STXBP4Q6ZWJ1 553 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 MDGA1Q8NFP4 955 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 FAM84AQ96KN4 292 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 PCIF1Q9H4Z3 704 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 CRTAC1Q9NQ79 661 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 PANK4Q9NVE7 773 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 CLIC4Q9Y696 253 aa20.35■□□□□ 0.85
GGPS1-206ENST00000488594 ZNF840PA6NDX5 716 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 ZNF233A6NK53 670 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 PDCP20941 246 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 WARSP23381 471 aaKnown RBP20.34■□□□□ 0.85
GGPS1-206ENST00000488594 LMO2P25791 158 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 EIF2DP41214 584 aaKnown RBP20.34■□□□□ 0.85
GGPS1-206ENST00000488594 ZXDBP98169 803 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 CYP27A1Q02318 531 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 ZNF252P-AS1Q0IIN9 211 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 GAB4Q2WGN9 574 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 ADGRG2Q8IZP9 1017 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 MYCBPAPQ8TBZ2 947 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 UPF2Q9HAU5 1272 aaKnown RBP20.34■□□□□ 0.85
GGPS1-206ENST00000488594 CFAP47Q6ZTR5 3102 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 VPS37CA5D8V6 355 aaPredicted RBP20.34■□□□□ 0.85
GGPS1-206ENST00000488594 OLFM2O95897 454 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 CYP17A1P05093 508 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 STAT6P42226 847 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 LMBRD2Q68DH5 695 aaPredicted RBP20.34■□□□□ 0.85
GGPS1-206ENST00000488594 UNQ6494/PRO21346Q6UXR6 183 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 FILIP1Q7Z7B0 1213 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 CCDC33Q8N5R6 958 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 OR5B17Q8NGF7 314 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 OLIG1Q8TAK6 271 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 CHD6Q8TD26 2715 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 PCED1BQ96HM7 432 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 SPACA7Q96KW9 195 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 C8orf48Q96LL4 319 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 CEP295Q9C0D2 2601 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 KIAA1586Q9HCI6 787 aa20.34■□□□□ 0.85
GGPS1-206ENST00000488594 EVLQ9UI08 416 aaPredicted RBP20.34■□□□□ 0.85
GGPS1-206ENST00000488594 PTPRJQ12913 1337 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 CDX4O14627 284 aaPredicted RBP20.33■□□□□ 0.84
GGPS1-206ENST00000488594 GIPC1O14908 333 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 PRPF6O94906 941 aaKnown RBP20.33■□□□□ 0.84
GGPS1-206ENST00000488594 BCKDHBP21953 392 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 DHPSP49366 369 aaPredicted RBP20.33■□□□□ 0.84
GGPS1-206ENST00000488594 USP46P62068 366 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 LMAN2Q12907 356 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 DHCR24Q15392 516 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 LPCAT2Q7L5N7 544 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 DDX42Q86XP3 938 aaKnown RBP eCLIP20.33■□□□□ 0.84
GGPS1-206ENST00000488594 WDR49Q8IV35 697 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 CCDC65Q8IXS2 484 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 WHAMMQ8TF30 809 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 CLIC6Q96NY7 704 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 PNKPQ96T60 521 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 MMS19Q96T76 1030 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 FGFBP2Q9BYJ0 223 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 CPQQ9Y646 472 aa20.33■□□□□ 0.84
GGPS1-206ENST00000488594 ADH1CP00326 375 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 APODP05090 189 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 PDGFRBP09619 1106 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 FAM163BP0C2L3 166 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 DPP6P42658 865 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 IRX4P78413 519 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 FOXC1Q12948 553 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 BYSLQ13895 437 aaKnown RBP20.32■□□□□ 0.84
GGPS1-206ENST00000488594 EOGTQ5NDL2 527 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 TTC30AQ86WT1 665 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 PIGKQ92643 395 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 SLITRK1Q96PX8 696 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 RNF38Q9H0F5 515 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 SNX25Q9H3E2 840 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 POLMQ9NP87 494 aaPredicted RBP20.32■□□□□ 0.84
GGPS1-206ENST00000488594 MORC2Q9Y6X9 1032 aaPredicted RBP20.32■□□□□ 0.84
GGPS1-206ENST00000488594 KIAA1549LQ6ZVL6 1849 aa20.32■□□□□ 0.84
GGPS1-206ENST00000488594 A0A0A0MRY4 1105 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.31■□□□□ 0.84
GGPS1-206ENST00000488594 C1QTNF9BB2RNN3 333 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 PATE3B3GLJ2 98 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 F8VP50 259 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 TNFRSF10BO14763 440 aa20.31■□□□□ 0.84
GGPS1-206ENST00000488594 TACC1O75410 805 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms