RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 C2orf42Q9NWW7 574 aa20.6■□□□□ 0.89
CD55-209ENST00000488171 SMG5Q9UPR3 1016 aaKnown RBP20.6■□□□□ 0.89
CD55-209ENST00000488171 ZNF292O60281 2723 aa20.6■□□□□ 0.89
CD55-209ENST00000488171 A8MXQ7 604 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 K7ESF4 209 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 PAPSS2O95340 614 aaPredicted RBP20.59■□□□□ 0.89
CD55-209ENST00000488171 CDH8P55286 799 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 NOP14P78316 857 aaKnown RBP20.59■□□□□ 0.89
CD55-209ENST00000488171 NCOA4Q13772 614 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 PDGFRLQ15198 375 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 ZNF699Q32M78 642 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 TMEM196Q5HYL7 178 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 SYNPOQ8N3V7 929 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 ZNF518BQ9C0D4 1074 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 SCAND2PQ9GZW5 306 aaPredicted RBP20.59■□□□□ 0.89
CD55-209ENST00000488171 GOLPH3LQ9H4A5 285 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 OTOGLQ3ZCN5 2332 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 HELZP42694 1942 aaKnown RBP20.59■□□□□ 0.89
CD55-209ENST00000488171 DCHS1Q96JQ0 3298 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 A0A1W2PQ27 194 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 A0A1W2PQ64 194 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 A0A1W2PQD8 194 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 CLDN5O00501 218 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 TRDMT1O14717 391 aaKnown RBP20.59■□□□□ 0.89
CD55-209ENST00000488171 RHOBTB3O94955 611 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 HDCP19113 662 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 RAP1GAPP47736 663 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 DMWDQ09019 674 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 DPYDQ12882 1025 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 KCNB1Q14721 858 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 ZNF667Q5HYK9 610 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 FSTL4Q6MZW2 842 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 TMC2Q8TDI7 906 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 SH3RF2Q8TEC5 729 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 OSCP1Q8WVF1 389 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 ELOVL4Q9GZR5 314 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 SDCBP2Q9H190 292 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 TRAF3IP3Q9Y228 551 aa20.59■□□□□ 0.89
CD55-209ENST00000488171 WDR87Q6ZQQ6 2873 aa20.58■□□□□ 0.89
CD55-209ENST00000488171 TCF3P15923 654 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 ZXDBP98169 803 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 ZACNQ401N2 412 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 C1orf220Q5T0J3 134 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 KRBA2Q6ZNG9 492 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 TTC16Q8NEE8 873 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 DUS2Q9NX74 493 aaKnown RBP20.58■□□□□ 0.88
CD55-209ENST00000488171 TRPM5Q9NZQ8 1165 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 NCDNQ9UBB6 729 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 ARHGAP26Q9UNA1 814 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 ATP6V1DQ9Y5K8 247 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 WNT6Q9Y6F9 365 aa20.58■□□□□ 0.88
CD55-209ENST00000488171 EP300Q09472 2414 aaPredicted RBP20.57■□□□□ 0.88
CD55-209ENST00000488171 ZNF840PA6NDX5 716 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 PFKLP17858 780 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 HOXC13P31276 330 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 ID4P47928 161 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 GRSF1Q12849 480 aaKnown RBP eCLIP20.57■□□□□ 0.88
CD55-209ENST00000488171 EML3Q32P44 896 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 CEP135Q66GS9 1140 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 NAIF1Q69YI7 327 aaPredicted RBP20.57■□□□□ 0.88
CD55-209ENST00000488171 PKN3Q6P5Z2 889 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 SCARA5Q6ZMJ2 495 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 ECT2Q9H8V3 914 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 GDPD2Q9HCC8 539 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 FBRSL1Q9HCM7 1045 aaKnown RBP20.57■□□□□ 0.88
CD55-209ENST00000488171 EHD2Q9NZN4 543 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 DMXL1Q9Y485 3027 aa20.57■□□□□ 0.88
CD55-209ENST00000488171 CHURC1-FNTBB4DL54 471 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 IKBKBO14920 756 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 CALUO43852 315 aaPredicted RBP20.56■□□□□ 0.88
CD55-209ENST00000488171 GJA4P35212 333 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 FNTBP49356 437 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 PDE6CP51160 858 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 NFIL3Q16649 462 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 SGSM1Q2NKQ1 1148 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 PAQR9Q6ZVX9 377 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 SV2AQ7L0J3 742 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 CPA6Q8N4T0 437 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 RNF38Q9H0F5 515 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 MAPK8IP1Q9UQF2 711 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 FRMD4BQ9Y2L6 1034 aa20.56■□□□□ 0.88
CD55-209ENST00000488171 GPR179Q6PRD1 2367 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 MAPK13O15264 365 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 CLSTN1O94985 981 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 ZNF202O95125 648 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 KIF20AO95235 890 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 OLFM2O95897 454 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 EGFP01133 1207 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 PPP3CCP48454 512 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 IFNAR2P48551 515 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 GALK1P51570 392 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 AMPD2Q01433 879 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 TAF10Q12962 218 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 ATP2A3Q93084 1043 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 CCDC47Q96A33 483 aaKnown RBP20.55■□□□□ 0.88
CD55-209ENST00000488171 RMDN1Q96DB5 314 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 KCNK16Q96T55 309 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 LINC00597Q9H2U6 94 aa20.55■□□□□ 0.88
CD55-209ENST00000488171 HRO43593 1189 aa20.54■□□□□ 0.88
CD55-209ENST00000488171 AKAP3O75969 853 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms