RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 RHOBTB3O94955 611 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 OLFM2O95897 454 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 C4BPAP04003 597 aaKnown RBP11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CKMP06732 381 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ATICP31939 592 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NOP14P78316 857 aaKnown RBP11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZXDBP98169 803 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DMWDQ09019 674 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 BIRC3Q13489 604 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NCOA4Q13772 614 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 LRRC32Q14392 662 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZACNQ401N2 412 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZCWPW2Q504Y3 356 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FSTL4Q6MZW2 842 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DENND5BQ6ZUT9 1274 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SPEM1Q8N4L4 309 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DCLK2Q8N568 766 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FSIP1Q8NA03 581 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 OR6B3Q8NGW1 331 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CYP2S1Q96SQ9 504 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FAM126AQ9BYI3 521 aaPredicted RBP11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ELOVL4Q9GZR5 314 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SNX25Q9H3E2 840 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 GKN1Q9NS71 199 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MAGEC2Q9UBF1 373 aaPredicted RBP11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NXF1Q9UBU9 619 aaKnown RBP11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 HMGXB4Q9UGU5 601 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CEP192Q8TEP8 1941 aa11.96□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TRAV19A0A0A6YYK7 116 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 CLDN5O00501 218 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TRIM66O15016 1216 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TCF3P15923 654 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 PTPN1P18031 435 aaKnown RBP11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 GNL1P36915 607 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 CDH8P55286 799 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TRPC3Q13507 836 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 RUNX3Q13761 415 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 NFIL3Q16649 462 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 EML3Q32P44 896 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TMEM196Q5HYL7 178 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 DGKKQ5KSL6 1271 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 KRBA2Q6ZNG9 492 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 FAM35AQ86V20 835 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ARL14EPQ8N8R7 260 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 RUBCNQ92622 972 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 EZH1Q92800 747 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 C8orf48Q96LL4 319 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 B3GNT5Q9BYG0 378 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 SCAND2PQ9GZW5 306 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 THG1LQ9NWX6 298 aaKnown RBP11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ARHGAP26Q9UNA1 814 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 WNT6Q9Y6F9 365 aa11.95□□□□□ -0.5
RAB11FIP3-210ENST00000487899 A8MXQ7 604 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 AKAP3O75969 853 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ASS1P00966 412 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 OAS1P00973 400 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 FAM163BP0C2L3 166 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 USP17L7P0C7H9 530 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TRIM49P0CI25 452 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TRIM49CP0CI26 452 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ANXA13P27216 316 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 GJA4P35212 333 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 GRIK1P39086 918 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ASPAP45381 313 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 AP3M2P53677 418 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 KCNB1Q14721 858 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ZNF667Q5HYK9 610 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 CEP135Q66GS9 1140 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 SPOPLQ6IQ16 392 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 PAQR9Q6ZVX9 377 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 KIAA2013Q8IYS2 634 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TMC2Q8TDI7 906 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 SH3RF2Q8TEC5 729 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 OSCP1Q8WVF1 389 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ATRIPQ8WXE1 791 aa11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 MYO18AQ92614 2054 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP3-210ENST00000487899 NYNRINQ9P2P1 1898 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ZNF840PA6NDX5 716 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TRDMT1O14717 391 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TNFRSF10BO14763 440 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 MAPK13O15264 365 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 PHACTR2O75167 634 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 EGFP01133 1207 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 NR2F2P24468 414 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 PIK3CAP42336 1068 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 CXCL12P48061 93 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ORC1Q13415 861 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 GAB4Q2WGN9 574 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 SV2AQ7L0J3 742 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ERMP1Q7Z2K6 904 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 FUKQ8N0W3 1084 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 SYNPOQ8N3V7 929 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 GUF1Q8N442 669 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ZMIZ2Q8NF64 920 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ATP2A3Q93084 1043 aa11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-210ENST00000487899 TWNKQ96RR1 684 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms